Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01698 ATGGAGCCCGATGAGAAAAAAGCAATGATTCGCGATATCGCGCTACAAGTCTTCGTCATCTCCATCGCCATCGTCTCCTTCCTCTGGATGCACGGCATTCCCCAGCGCCTCTATGCCAAGCTCCGCCACCGTCCCCCAAACCCACGCGCCGTCCAAGCGAAAAGTCATTTCGTCAAAGGCGCGCAACTCGTCTCGCAAGCCAGAAGATCCAAAAACGCCTCCGTCACAGTCTCCCTCGCTAAACAGGCTCTAGAGGAAGCCGAGAAGGCCATCGCGCTGGATCCTAAGGACGCCGCCTCGCACTTCTTGAAGTCCATGGCGCTCGATCTCCAGGGCTTCCGTAGCAACGCGCTGGACGCGCTGGACGCCGCGCTGTCTCCGCTGGCCGCGGCGTCGCTGGCGGCCGACGAGAGAGGCGACGCACTGCTGAAGAGAGCGGAGCTGAAGATCTCGTTGAGCAAGAAGCGCGTTGACTCGGTGCTGGCGGATTTGAACGAGTCAGTGAAGCTGAGTCCCCGGAACCCGAAAGCGTGGTGCATGCTGGGAGAGTGTTATGAGGGAAATGATATGGGAGAGGAAGCGAAGAAGGCTTATAAAGAGGCTCTCCAATTGGAGCCACAATCGGACGTGGCTCAGGAAGCTCTCAACAGGTTGGGTTCGTAG 663 0.5852 MEPDEKKAMIRDIALQVFVISIAIVSFLWMHGIPQRLYAKLRHRPPNPRAVQAKSHFVKGAQLVSQARRSKNASVTVSLAKQALEEAEKAIALDPKDAASHFLKSMALDLQGFRSNALDALDAALSPLAAASLAADERGDALLKRAELKISLSKKRVDSVLADLNESVKLSPRNPKAWCMLGECYEGNDMGEEAKKAYKEALQLEPQSDVAQEALNRLGS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01698 220 Pfam Tetratricopeptide repeat 175 207 IPR001440 GO:0005515
Vian4g01698 220 SUPERFAMILY TPR-like 81 214 IPR011990 GO:0005515
Vian4g01698 220 Gene3D Tetratricopeptide repeat domain 132 220 IPR011990 GO:0005515
Vian4g01698 220 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Vian4g01698 220 Gene3D Tetratricopeptide repeat domain 40 131 IPR011990 GO:0005515
Vian4g01698 220 SMART tpr_5 175 208 IPR019734 GO:0005515
Vian4g01698 220 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 80 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01698 Vian-Chr4 33068154 33068816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01698 - - vum:124835704 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01698 4 33068154 33068816 Vian4g01698 4 33068154 33068816 ECH