Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01691 ATGTCATTCTATTCAACGTCGTCGTTCCGTTGCAGTTTCGCGCTCTGCAATCCGAAGCTGCAGCCTCTCGTTTCAATGTCACTGTCTTCGAAGCTACCGTTGCACTTTTCCGGCAACGCTCGATTCAACCGCAACCATGTCCACCACCACCCAACCGCACTCAGAATTCGTGCTTCAAACGCAAGTTCATCGGGAAGTGGCACCAACCTCGTCTTATTGAGCTCCACTGTCACCGTTACAACAGCGGTAGCCAATCGCGTGCTTTACAAATTGGCCCTTGTTCCCATGAAAGAATACCCTTTTTTTCTCGCCCAGTTCATAACTTTTGGGTATGTTGTTATATATTTCTCCATCTTGTATATTCGGTACCGGGCTAGAATAGTAACCGATGAGATGATGGCAATTCCGAAATTGCGTTTTGTCGCCATTGGACTTCTGGAAGCTTTGGGATTGGTTGCTGGAATGTCTGCTGGAGCCTTACTTCCTGGACCAGTCATACCCATATTGAATCAGTATGTTCTGATGGCATGGCTACATTTGTGGTTTGTGCTCTGGGCCTGTCCTTTTATTCCAACTAAGAAGGAAGAGAATGATAATATTGCTGTAAAATCTGTGACATTTTTGGTTTGGCAGCTAATGTTTTCCAGCCTTCTCTTGAAAAGAAAGTACACAATCAATCAATTGATTGGGTGTTTACTTGTAGCCTCCGGTGTCATAGTGGCTATTACAAGTGGCTCAAATGCTGGTCAAATGCTCTCTGATATTCAGTTCTTTTGGCCAGCATTGATGATAATTTCATGTGCTTTTCAAGCTTTGGCTTCTGTAATCAAGGAGTATATTTTTATTGACTCAGCTACTCGATTAAAGCACAAGTCACTGGACATATTTGTGGTCAATTCGTTTGGATCTGGCTTTCAGGCTCTTTTCGTATTTCTGTCTCTGCCTTTACTTTCAAAATTGAAAGGCATACCATTTGCTGAACTTCCTTCATATTTTAAAAGCGGTGCCGGTTGTTTTCTAGGTAAACCAGATCTTGTGGCTATCACAAGGTTCATGTCATATTCGATACCTTACCTTTTATGTACTAGGATTATAGATGCTTTTAGTCCTTCAGGTTGTGATGGCGCTCCCCTACTTCCACTGCTTTACATAATTACCAATTTGGCATTCAACATATCCCTCCTTAATGCAGTAAAAACTTCTTCTGCAGTTGTATCTTCTCTTCTAGTAATGTTGTCAGTGCCCATATCTGTTTATATTCTTTCTCTACCATTACCATATCTTCCCGAGGGAACAAGCTTGAGCCCATTTTTTTTGCTTGGCTGTGGAATTCTTCTGTGTGGTCTCTTACTGTACAACACATCTCGACCTGTGAGGAACAGCTCTGAAGTGGACTGA 1398 0.4242 MSFYSTSSFRCSFALCNPKLQPLVSMSLSSKLPLHFSGNARFNRNHVHHHPTALRIRASNASSSGSGTNLVLLSSTVTVTTAVANRVLYKLALVPMKEYPFFLAQFITFGYVVIYFSILYIRYRARIVTDEMMAIPKLRFVAIGLLEALGLVAGMSAGALLPGPVIPILNQYVLMAWLHLWFVLWACPFIPTKKEENDNIAVKSVTFLVWQLMFSSLLLKRKYTINQLIGCLLVASGVIVAITSGSNAGQMLSDIQFFWPALMIISCAFQALASVIKEYIFIDSATRLKHKSLDIFVVNSFGSGFQALFVFLSLPLLSKLKGIPFAELPSYFKSGAGCFLGKPDLVAITRFMSYSIPYLLCTRIIDAFSPSGCDGAPLLPLLYIITNLAFNISLLNAVKTSSAVVSSLLVMLSVPISVYILSLPLPYLPEGTSLSPFFLLGCGILLCGLLLYNTSRPVRNSSEVD 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01691 465 PANTHER PROTEIN CLT2, CHLOROPLASTIC 200 459 IPR013936 -
Vian4g01691 465 Pfam CRT-like, chloroquine-resistance transporter-like 71 174 IPR013936 -
Vian4g01691 465 Pfam CRT-like, chloroquine-resistance transporter-like 211 452 IPR013936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01691 Vian-Chr4 32912882 32919888 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01691 - - var:108329981 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01691 4 32912882 32919888 Vian4g01691 4 32912882 32919888 ECH