Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01683 ATGGAAAATATTTGTAACGAAGAACACAATCCTCTGATAAAGTCAAAATCGCAAAACGGATCTAACAGTAACATTCATTCTCTCCTCTACCGATCATGTTCCGAATACAGCAACCTATGGAAAATCGCCGCCCCTTCAATCCTCACCCGCCTAGCCATGTTCTCCATCACCGTCGTCACCCAGTCCTTCGCCGGCCACCTCGCTGACCTTGATCTCGCCGCCATTTCGATCGCCTGCACCGTCCTCATCTCCGTCACCTTCGGCTTCATGTTGGGTATGGCCAGTGCACTTGAGACGCTATGCGGCCAGGCCTACGGCGCCGGACAGCATCGGATGTTGGGCGTTTATCTGCAACGCTCGTGGGTTGTTCTGTCTCTTGCCTCGATTCTGATGCTGCCGGTGTTCGTGTTCGCGACGCCGCTGTTGAAGTTGGTGGGGCAGCCCGTCGCGGTGGCGGAGCAGGCGGGGCTGGTGGCGGTCTGGTTGATCCCGTTTCACCTCAGTTTCCCGTTTCAGTTCACATTGCAGCGGTTCCTGCAGTGCCAGTTAAAGACCGCTATCGTTGCTTGGGTTTCAGGGGCGGCTCTTGCGATTCATGTTTTAGTGAGTTGGGTTTTTGTTTATCGGATGAGAATTGGGATCGTTGGGGCTGCACTTTCCATTGGTTTCTCGTGGTGGCTCTCGGTTTTGGGAATGCTCGGGTATACACTCTTTGGTGGGTGCCCGTGTTCGTGGACTGGTTTTTCTGCTGAAGCTTTTGTCGGTCTCTGGGAATTCTTTAAACTCTCTTTGGCTTCTGGCATCATGCTTGCGTTAGTAAAGGATCCTACAATAGCTTCAGGCTCCTCGGGTACATGGCTTGAGCGTGGAGTTGTGTACCTTCCAGACTTGTTAGAGAATTTCTATTACAGACTGTTGCTCATAGTCTCTGGATATATGCACAACACTGAGATTGCAATTGATGCTCTTTCTGTTTGTGTCACGATATATGGCTGGGAATCCATGATACCGCTTGCATTTTTGGGTGCAACAGGGGTTCGTGTAGCAAACGAGCTTGGCGCAGGCAATGCAGAAGGTGCAAAATTTGCAACTTTGGTTTCTGTGGTAAATACTGTACTGGTGGGATTTATATTTTGGTTGGTAGTTGTGTTCTTCAACAAGAATCTTGCCTTGATCTTTACATCGAGCTCGTCAGTTATCCAAATAGTCAATGATCTGGCAATGTTGTTAGCTTTTACTGTTCTTCTTAATTGCATTCAACCAGTTCTTTCAGGGGTGGCAGTAGGATCTGGTCGTCAAGCAGTGGTGGCATATATAAACATTGGCAGTTACTACTTGGTTGGAATACCTCTGGGGATTCTCCTAGGCTGGTTTCTTCCTTCGAGTATCGTTGGAATGTGGAGTGGAATGATGAGTGGAACGGTGGTTCAAACATTGATCTTGGCTACTATTACGATGAGATATGATTGGGAGAAAGAGGTTCGGAAAGCTCAAATTCTCATCAAAGACGAAGCAACATCCAACCAATAA 1530 0.4837 MENICNEEHNPLIKSKSQNGSNSNIHSLLYRSCSEYSNLWKIAAPSILTRLAMFSITVVTQSFAGHLADLDLAAISIACTVLISVTFGFMLGMASALETLCGQAYGAGQHRMLGVYLQRSWVVLSLASILMLPVFVFATPLLKLVGQPVAVAEQAGLVAVWLIPFHLSFPFQFTLQRFLQCQLKTAIVAWVSGAALAIHVLVSWVFVYRMRIGIVGAALSIGFSWWLSVLGMLGYTLFGGCPCSWTGFSAEAFVGLWEFFKLSLASGIMLALVKDPTIASGSSGTWLERGVVYLPDLLENFYYRLLLIVSGYMHNTEIAIDALSVCVTIYGWESMIPLAFLGATGVRVANELGAGNAEGAKFATLVSVVNTVLVGFIFWLVVVFFNKNLALIFTSSSSVIQIVNDLAMLLAFTVLLNCIQPVLSGVAVGSGRQAVVAYINIGSYYLVGIPLGILLGWFLPSSIVGMWSGMMSGTVVQTLILATITMRYDWEKEVRKAQILIKDEATSNQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01683 509 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g01683 509 CDD MATE_eukaryotic 35 496 IPR045069 GO:0042910|GO:1990961
Vian4g01683 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 490 - -
Vian4g01683 509 Pfam MatE 297 453 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian4g01683 509 Pfam MatE 45 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01683 Vian-Chr4 32840971 32850071 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01683 K03327 - gmx:100814869 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01683 4 32840971 32850071 Vian4g01683 4 32840971 32850071 ECH