Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01672 ATGGCGCTTGTTTTTGAGGTTCTTGGCAGATTCAACCGTGCTCGCGCTGCCCGGTTGACACTCCCTCATCATGTGTGTCAAACTCCTTTGTTTATGCCTGTGGGCACACAAGGAACAATAAAGGGATTGACAAATAGTCAGCTTGAGGATATAGGTTGCCAAATAATACTTGGAAATACTTATCACTTGGCCCTTCGACCTACTTCTGAGCTTCTTGATGAAGTTGGTGGCCTTCATAATTTTATGAATTGGCAAAGGGGTCTGCTTACAGATTCTGGTGGCTTTCAAATGGTTTCGCTGTTGCATCTTGCTGACATCACAGAAAAAGGTGTGACATTTCAGTCACCGGTTGATGGAAAGCCGATGCTTCTAACACCAGAGGAATCAATTCAAATCCAAAACAGAATTGGAGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATTACTGGTCCACGAGTTGAGGAAGCTATGTATCGAACACTTAGATGGATAGACAGATGTATAGCAGCTCACAAGAGACCTCATGATCAAAACTTATTTGGTATTGTTCAAGGTGGTTTAGATCCTATATTGAGGGATATCTGTGCTAAGGGTTTGGTGGAGCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTTCAGGCGGTGAAGATAAAAATTCATTTTGGCGAGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAGGATAAACCACGATATGTTATGGGAGTTGGTTATCCTCTTGATATTGTTGTTTGTAGTGCTTTGGGTGCTGATATGTATGACTGCGTGTATCCCACCCGTACAGCACGCTTTGGCACTGCTCTCATTCCTGAGGGAGTATTGAAATTAAAACACAAAGCAATGGCTGAAGACACGCGTCCAATTGATCCCACTTGCCCTTGTATGGTTTGCAAGAACTATACCAGGGCTTACATCCATTGCCTTGTGACAAAAGATGCAATGGGATCTCAGCTTTTGTCGTATCATAATTTATACTACATGCTGCAGCTCAGTAGGAATCTACACTTTTCAATAGTTGAAGGAAGGTTTCCAGAGTTTGTATGTGACTTTCTACACAAAATGGTATGCTCGAGAAAATCGCCTGGACCTTGA 1125 0.4302 MALVFEVLGRFNRARAARLTLPHHVCQTPLFMPVGTQGTIKGLTNSQLEDIGCQIILGNTYHLALRPTSELLDEVGGLHNFMNWQRGLLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRVEEAMYRTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPILRDICAKGLVERNLPGYAIGGLSGGEDKNSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMAEDTRPIDPTCPCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMLQLSRNLHFSIVEGRFPEFVCDFLHKMVCSRKSPGP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01672 374 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 364 IPR004803 GO:0008479|GO:0101030
Vian4g01672 374 SUPERFAMILY tRNA-guanine transglycosylase 1 364 IPR036511 GO:0006400|GO:0016763
Vian4g01672 374 Pfam Queuine tRNA-ribosyltransferase 13 364 IPR002616 GO:0006400|GO:0016763
Vian4g01672 374 NCBIfam tRNA-guanine transglycosylase 5 365 IPR002616 GO:0006400|GO:0016763
Vian4g01672 374 NCBIfam tRNA guanosine(34) transglycosylase Tgt 5 365 IPR004803 GO:0008479|GO:0101030
Vian4g01672 374 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 2 371 - -
Vian4g01672 374 Gene3D - 1 367 IPR036511 GO:0006400|GO:0016763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01672 K00777 - gmx:100819664 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01672 4 32689374 32698069 Vian4g01672 4 32689374 32698069 ECH