Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01656 ATGGCTTGGCGCTTCTCCTCCTTCGTCTCCACCATCGAATCCTCAAAAACCCTAAACCCTAACCCTTTCTCCTCCACAGCCCCATTCTCCACCTCCTTCCTCGTCACCAAAACCCCCAAAAAGTTCAAGAAAAAACGTAAGCCCAAGCCCAGCCCTCGAACCACTCCGGTTCAAACCCAGCCCAACCTCATCCCCTCTCTCGAGCGCATTCTCCACCGCGACGCCCTCCTACGCTTCGTCACGCGCTCCAAGCAGTTCCTCTCCGCCCAGCCGGAGCACGTCCTCCGCCTCGATGACGCCGGCAAGCTCCACCGCGAGCTCGGATTCCCGCGCGGCCGTAAGGTCTCCCGCTTCCTCCAGCGCCACCCCCTCCTCTTTCAAACCTACCGTCACACCGACGGCAAGTCATGGCTTGGCTTCACTGATCTCATGGAGGACCTTCTCGCTGAGGAGCACTCCCTCATGGACGCAATGGAACTGAACCGCGTCGAGAAGGTTCGCAAACTCCTTATGATGTCCGCGCGCAACCGCATTCCCTTGAGCAAAATCCACCACTGCAGAACCCTCTTTGGCATCCCCGATGATTTCCGCGACAGGGTCGCCAAATACCCTGACTTTTTCAAAATAGCGGTTGATAGCGACGGCAAGAGGGTGCTGGAGTTGGTGAAGTGGGACCCGCTTCTCGCCGTGAGTGCTCTTGAGAGGGAGTTCGTTGTTAACGAGGATTCGGCTAAGCGGAAGTTTAGGTTTCCGGTGAAGTATGGGAAGGATTTGGATTTGGAATTGGACGATAATAGGAAGCTTGATTTGCTGAACTCGCTTCCCTTGGTGTCTCCCTATTCGGATGGGCATAGGTTTGATTTGTGGACGTTGGAGGCGGAAAAGTATCGGGTTGGGTTGATTCATGAGTTCTTGAGCTTGACTTTGGAGAAGAGGGCATCCATTCATCACCTTGTGGAGTTCAAGGAGGAGTTTAGTTTGACGAAGCATACTTATCAGATGCTGCGGAAACAGCCCAGAGCGTTTTACTTGGCCGGGACTGAGATGAATTGGGATGTGTTCTTGAAGGATGCCTATGACGAGAATGGGGCTATGATTGAGAAGGATCCCCAGGTATTGTTTAATGAGAAGCTTTATAAGTATGCTCAGGTAGACCAAATGGAACATGATCCCGGGGTGGAAGAGCATCATTTTACTTGA 1200 0.5308 MAWRFSSFVSTIESSKTLNPNPFSSTAPFSTSFLVTKTPKKFKKKRKPKPSPRTTPVQTQPNLIPSLERILHRDALLRFVTRSKQFLSAQPEHVLRLDDAGKLHRELGFPRGRKVSRFLQRHPLLFQTYRHTDGKSWLGFTDLMEDLLAEEHSLMDAMELNRVEKVRKLLMMSARNRIPLSKIHHCRTLFGIPDDFRDRVAKYPDFFKIAVDSDGKRVLELVKWDPLLAVSALEREFVVNEDSAKRKFRFPVKYGKDLDLELDDNRKLDLLNSLPLVSPYSDGHRFDLWTLEAEKYRVGLIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYQMLRKQPRAFYLAGTEMNWDVFLKDAYDENGAMIEKDPQVLFNEKLYKYAQVDQMEHDPGVEEHHFT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01656 399 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 43 386 IPR045040 GO:0003723
Vian4g01656 399 MobiDBLite consensus disorder prediction 38 60 - -
Vian4g01656 399 Pfam Plant organelle RNA recognition domain 65 384 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01656 Vian-Chr4 32502524 32503723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01656 - - gmx:100813429 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01656 4 32502524 32503723 Vian4g01656 4 32502524 32503723 ECH