Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01654 ATGTCGACGCTGGAAGCGGAAGCGGAACCCTCCTCCAATCACATTCACTCTCTTCCGTTAGTTGACCTCCGCCTCCTGTCTCAGCCCGAACTCTACACCCTCTCCCTCTCTGGCGCCACTCACCGCCATCAACGAGCCAGCGACAACGATCCCGTCATTCCCAAGATCGACCGTTCTAATTTCAACGAATCCGCGGGCAGCCGCAAACAGACCTTCTCCAAACTACGCCTCAACAAGCGCAAACAAAATTCCGCGGCTCTCGCCTCTTCCTCTTACCACATTCCGGAGCCCGTCGACCGAGAAAACTCCCAAATTATCTCTCTGCTGCAGCAACTCTTTGGCGTAGAGCCTCTTCGCAACGAGCTGCGCCCCAACAGCGGTGATGCAGCGGACCGTCAATTGTTTCCGGTCCATGTTGAGTTCAAACAGCCGCCTCCACTGCCTGTGGCGTTTCAGAACGTTCCAATTGACGTTATTGATGCTTCTAATAGGAAGAGGAAGCGCGGGCGGCCGAGGAAGAACGAGAATTTGGTAACGGTATTCGAGGAGGAGACCAAGAAGGTTAACGAAGAGGGCAGCACAGTGGTCAGGGTCAACGAGAGGGGATTTGGTATGGACGCAGATGGTTTGGATTATGATCCTTTTGGGGAGGAGTTGAAGAGAAGGACGGAAGGGTTGGAGACGGAACGACAGTTGTTGGAATTTTTGGAGACTCTGAATGGAGAGTGGGCGAGTCAGAGGAAGAAGAGGCGGATTGTCTCGGCCAGTGATCTTAGCGACTTGTTGCCTGCCGGATGGAAGATAGTTATTACCCTTTTGAGGAGGGCAGGTCGTGCTTCTGTTGTTTGTCGCCGTTACGTAAGTCCTGGTGGGCACCAGTTTGAGTCTTGCAAGGAAGCTTCTGCGTACTTGCTTTCTGTTTCTGGTGTTCAAGATAAGGGCTATTTAAAATCTAGTTGTACTGATGATGGTGCTCAGCAATTGTCCAGTAGTATGAACATGGCATCTGAAAGTAGTGTTGGTCATGTCCCTGCCAGAGCCACGAAGACTGATGCCAATGCAAATTATTCGTCTATTCACTCTGGTCAAGAGAATCAGCTCCCAATATCATTATCAGTTGGGAGTGGAAATTTCAACAGTGATCTAGCTTTGGGTTGTAAATCAGGAGCTGCTAGTGATGACTTTAGAGGCTTTGATCATCAAACGGAAGATAAAAAACTGTTGGAGGCTGATAAGAATGATGGAAGTTCAGTTCAGGGATGTTCTCACGTGAATGATATAGTTTGTAATGAGTCTACTGATGCTGCATGCAATCTTTATATTCCTTTAGTTTTCTCAACTCCCTTCTCCACTAATAATAGTGACAACGGTCAAATTTCAGATGCTGCGACATGCATAGAAGGGGGCATTAGTAATTTTGCTAGTCAGGATACAAATACCGGGTGCCCTGAAACTGTTCCCTGTGGAATTGACAACAATGGGCTTGGGCTTTCTGTGAAATTAGTGGAAGAGAACACTCAGAAAATAAGTTTTGATAGCAGCACACTGGCTCCAAATTCTGAGGGGAAAATATTTTCTGGTAAAAATTTAGAGGATAGACATCTTATCAGTTCACAGGAAGATATGGAAATTGCAGATGATAAGGTCACTAATGATGACAAACAATTAATTGTATGTGGCACAGACCGGTCTGAGTTTAAAGATGTTTTTACTGATATTAAACTGCAGAGTAGTTCTGAGGGTTTTTCACTTGTCACATCTCATTGTGAACTTAAACACGCATCTCTAAGTAATATGGACAGGACACAGACTTCCGAGTTGAAGGACTCTGCTGAGGAAAATATTTTTGACAGTGATCTATTTAGCTCATCTATTGATGAAAGAACATGTGTTCCAAGTGGTTACATTAGTAATGTTTCTTTTAGTTCTTGCACACAAGATGCAGTTGAGTATGGTGGATTTGATTTTTCTTCTGATCTTAAATTAACTAAGGATGTTAGTGATAATCATATTCTTTCTAATGAGGATGCTGTGACAAGATGTTTACAGGAGAGGAGTTCCTTGAATGACCAAAATAGCATGATGGGCAATCTTTTGCATCGTAGTTCTCAAAGTGACTTATTTGCTCTAACAGCTAATCAGCACCCTTCTGCTTTTCATGATAATTTGAATACCTGTGATGGAACCTTTGATGCACTCAAAGGTGTTGATGCTGGATACATGGAGCCTCAGTTGGGCATTGTTTCTTGCAGCAATATTGCTGTAGATGCATATACTACTGCGAGCATTATGCAGGGAAACTCACAAGGATGTGTATCTGTTCCTCTTGGTGGAAGTATATTAAACTTTGAAAAGAAAAGTGATGATGGTGCTAATAAAGCAAATAAGCCTTGCTTATCAGAAAAGTCTCAGAATGAAGTTGAAATATTTCAAACTGACTCTATGGGTCCACCCAAATTTCTTTAG 2466 0.4396 MSTLEAEAEPSSNHIHSLPLVDLRLLSQPELYTLSLSGATHRHQRASDNDPVIPKIDRSNFNESAGSRKQTFSKLRLNKRKQNSAALASSSYHIPEPVDRENSQIISLLQQLFGVEPLRNELRPNSGDAADRQLFPVHVEFKQPPPLPVAFQNVPIDVIDASNRKRKRGRPRKNENLVTVFEEETKKVNEEGSTVVRVNERGFGMDADGLDYDPFGEELKRRTEGLETERQLLEFLETLNGEWASQRKKRRIVSASDLSDLLPAGWKIVITLLRRAGRASVVCRRYVSPGGHQFESCKEASAYLLSVSGVQDKGYLKSSCTDDGAQQLSSSMNMASESSVGHVPARATKTDANANYSSIHSGQENQLPISLSVGSGNFNSDLALGCKSGAASDDFRGFDHQTEDKKLLEADKNDGSSVQGCSHVNDIVCNESTDAACNLYIPLVFSTPFSTNNSDNGQISDAATCIEGGISNFASQDTNTGCPETVPCGIDNNGLGLSVKLVEENTQKISFDSSTLAPNSEGKIFSGKNLEDRHLISSQEDMEIADDKVTNDDKQLIVCGTDRSEFKDVFTDIKLQSSSEGFSLVTSHCELKHASLSNMDRTQTSELKDSAEENIFDSDLFSSSIDERTCVPSGYISNVSFSSCTQDAVEYGGFDFSSDLKLTKDVSDNHILSNEDAVTRCLQERSSLNDQNSMMGNLLHRSSQSDLFALTANQHPSAFHDNLNTCDGTFDALKGVDAGYMEPQLGIVSCSNIAVDAYTTASIMQGNSQGCVSVPLGGSILNFEKKSDDGANKANKPCLSEKSQNEVEIFQTDSMGPPKFL 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01654 821 MobiDBLite consensus disorder prediction 39 70 - -
Vian4g01654 821 SUPERFAMILY DNA-binding domain 257 306 IPR016177 GO:0003677
Vian4g01654 821 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 4 362 IPR037472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01654 Vian-Chr4 32460792 32469722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01654 - - gmx:100780637 1136.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01654 4 32460792 32469722 Vian4g01654 4 32460792 32469722 ECH