Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01629 ATGGGCATCAGATTCACTTTTGCAGCCATCATTTTCCTGACTCTTCACACTGCTCACTCATCTAACCCACCATTCGCTTGCGATTGGTCCAATCCTGCCTCCAAATCCTACCCATTCTGCAACCCCAAACTCCCCATCCCTCAACGAACCAAAGACCTTCTCTCCAGACTCACACTTCAAGAGAAACTCTCCCAACTCGTCAACACTGCTCCTTCCATCCCCCGCCTCGGCATTCCCGCCTACCAGTGGTGGAGCGAGGCCCTCCACGGCGTAGGAAACGTCGGCCCCGGCATCCACTTCAACGCCTCCATCTCCTCCGCCACCAGCTTCCCTCAGGTCATCCTCAGTGCAGCCACCTTCGACTCCCTCCTCTGGTACCGAATCGGACGCGCCATTGGGATCGAAGCCCGCGCAATCTATAATGCAGCCCAGGCCCAGGGCCTCACCTTCTGGGCTCCCAATATCAACATCTTCAGGGACCCGCGATGGGGCAGAGGGCAAGAGACACCCGGCGAAGACCCTCTCCTCACTTCTCGCTACGCAGTTTCCTACGTCAGAGGCCTCCAAGGAGACTCCTTCCACGGCCGCAAGTTGAGGGGCCACCTTCAAGCCTCCGCCTGTTGCAAACACTTCACCGCTTACGATCTGGACAATTGGAAGGGCGTCGATCGCTTTCTCTTCGATGCTCGCGTGAGTTTGCAAGATTTAGCGGACACGTACCAGCCTCCGTTTCAGAGTTGCGTACAGCAAGGAGGGGCCAGTGGGATAATGTGTGCTTACAACCGCGTGAACGGAGTTCCAAGCTGTGCGGATTTCAACCTGTTAACCAAAACGGTCAGAAAAAAATGGCATTTCCGTGGCTATATTACGTCGGATTGTGGAGCAGTCGGGATCATACATGACCAGCAAGGGTTTACGAAATCAGCGGAGGAAGCTGTAGCTGATGTTCTTCGTGCTGGGATGGATGTGGAATGTGGAAGTTATCTGACGGATCATGCTGAATCGGCAGTGTTGCAGAAAAAAGTATCCATGTCTGAAATAGATCGTGCCCTTCACAACCTGTTTTCTATTAGAATGAGGTTAGGCCTGTTTGGTGGAAATCCAAGAAGTCTCCCATTTGGTATGATTGGTCCGAATCATGTGTGTTCCAAAGAGCACCAATATCTTGCTCTTGAAGCTGCAAGAAATGGCATTGTCCTCTTAAAAAACTCTCCCACACTTCTACCACTTCCAAAAACAAGCCCCAGTATTTCCTTAGCAGTGATAGGACCCAATGCCAATGCTTCTCCACTAACTCTTCTTGGAAACTATGCTGGTCCTCCTTGTAAATTTGTCACAATATTGCAAGGCTTTCAGCACTACGTTAAGAACGCCGTTTATCATCCTGGGTGTGATGGTGGACCAAAGTGTTCTTCGGCTAAAATCGAGCAGGCAGTAGAAGTTGCAAAAAAAGTGGATTATGTGGTGCTGGTTATGGGATTGGATCAAAGTGAAGAGAGGGAAGAACGTGATCGCATTCATCTAGACTTGCCGGGCAAGCAACTTGAACTCATCAACAGCGTTGCCGAAGCTTCTAAAAAACCAGTTATTTTGGTGCTGCTGTGTGGAGGGCCTGTAGATATCAGTTCAGCCAAGTATAACCACAAAATTGGAGGCATCCTCTGGGCTGGTTATCCCGGAGAACTTGGAGGCATTGCACTTGCACAGATTATCTTTGGCGACCACAACCCAGGAGGAAGACTTCCAGTTACTTGGTACCCAAAAGATTACATCAAAGTACCCATGACAGACATGAGAATGAGAGCCGATCCTTCTACGGGCTATCCTGGGAGAACTTACCGATTTTACAAAGGTCCAAAAGTGTATGAGTTTGGCTATGGACTGAGCTACTCGAAGTATTCCTATGAGTTTGTTTCTGTTACACATGACAAGCTTCACTTGAACCAATCATCCACTCATTTCACGGTTGAAAATTCAGAAACCGTAAGGTACAAACTTGTTTCGGAGTTGGGAGAACAAACCTGCCAAAGCATGTCACTCTCGGTCACTGTGAGAGTTCAAAATCATGGAAGCATGGTGGGGAAGCATCCTGTGTTGCTGTTTATGAGGCCTAAAATCCAGAAAAGTGGAAACCCTCTGAAACAGTTGGTTGGTTTCCAGAGCGTGATGCTTGATGCAGGGGAAATGGCTCATGTTGGATTTGCCGTAAGTCCTTGCGAACATCTTAGTAGAGCAAATGAAGCTGGTGCAATGATTATTGAAGAAGGGTCTCAGGTGTTGCTTGTGGATGATCAAGAGCACCCCATAGATATAATTGTTTGA 2322 0.4888 MGIRFTFAAIIFLTLHTAHSSNPPFACDWSNPASKSYPFCNPKLPIPQRTKDLLSRLTLQEKLSQLVNTAPSIPRLGIPAYQWWSEALHGVGNVGPGIHFNASISSATSFPQVILSAATFDSLLWYRIGRAIGIEARAIYNAAQAQGLTFWAPNINIFRDPRWGRGQETPGEDPLLTSRYAVSYVRGLQGDSFHGRKLRGHLQASACCKHFTAYDLDNWKGVDRFLFDARVSLQDLADTYQPPFQSCVQQGGASGIMCAYNRVNGVPSCADFNLLTKTVRKKWHFRGYITSDCGAVGIIHDQQGFTKSAEEAVADVLRAGMDVECGSYLTDHAESAVLQKKVSMSEIDRALHNLFSIRMRLGLFGGNPRSLPFGMIGPNHVCSKEHQYLALEAARNGIVLLKNSPTLLPLPKTSPSISLAVIGPNANASPLTLLGNYAGPPCKFVTILQGFQHYVKNAVYHPGCDGGPKCSSAKIEQAVEVAKKVDYVVLVMGLDQSEEREERDRIHLDLPGKQLELINSVAEASKKPVILVLLCGGPVDISSAKYNHKIGGILWAGYPGELGGIALAQIIFGDHNPGGRLPVTWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPKVYEFGYGLSYSKYSYEFVSVTHDKLHLNQSSTHFTVENSETVRYKLVSELGEQTCQSMSLSVTVRVQNHGSMVGKHPVLLFMRPKIQKSGNPLKQLVGFQSVMLDAGEMAHVGFAVSPCEHLSRANEAGAMIIEEGSQVLLVDDQEHPIDIIV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01629 773 Pfam Fibronectin type III-like domain 698 763 IPR026891 -
Vian4g01629 773 SMART Fn3_like_2 696 766 IPR026891 -
Vian4g01629 773 SUPERFAMILY (Trans)glycosidases 37 396 IPR017853 -
Vian4g01629 773 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Vian4g01629 773 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Vian4g01629 773 PRINTS Glycosyl hydrolase family 3 signature 110 129 IPR001764 GO:0004553|GO:0005975
Vian4g01629 773 FunFam probable beta-D-xylosidase 2 383 631 - -
Vian4g01629 773 Gene3D - 383 631 IPR036881 GO:0004553|GO:0005975
Vian4g01629 773 FunFam probable beta-D-xylosidase 7 49 370 - -
Vian4g01629 773 Gene3D - 49 370 IPR036962 GO:0004553|GO:0005975
Vian4g01629 773 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 633 IPR036881 GO:0004553|GO:0005975
Vian4g01629 773 Gene3D Immunoglobulins 658 772 IPR013783 -
Vian4g01629 773 Pfam Glycosyl hydrolase family 3 N terminal domain 74 354 IPR001764 GO:0004553|GO:0005975
Vian4g01629 773 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 630 IPR002772 GO:0004553|GO:0005975
Vian4g01629 773 PANTHER SUGAR HYDROLASE-RELATED 20 769 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01629 Vian-Chr4 32000928 32004793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01629 13 773 Glycoside Hydrolase AT1G78060 65.314 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01629 - - aprc:113867121 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01629 4 32000928 32004793 Vian4g01629 4 32000928 32004793 ECH