Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01624 ATGGCTGCTGAAGTATATTACCAGGCTATTGGCACTGTGCAGTCCCATTCTCATCTGAATAATTTGAATCGTCACCAGAAGCACCAAAACAACATAGTGAGATTAGTGGCTAGGGATTTTATCAGTGGTAATGGCTTGTCAAGGAGAAGTACTAACCGCTCTGGCCGGAGGAATTGTACAGTAATTCGATCTCTAGCTTCGCAAACATCAGTGGTCGATCCGGTGTTGTCTCCTTCAAGAAGCAACGCTGGTGACAGTAACAAGAAATCAAATGAAGCAGCTTTAATCCTTATTCGGCATGGCGAGTCATTATGGAATGAAAAGAACTTATTCACAGGGTGTGTTGATGTCCCTCTGAGCAAGAAGGGTATAGATGAAGCAATTGAAGCTGGAAAAAGAATTAGCAGCATTCCTGTTGATGTCATATTTACATCGGCTTTGATTCGTGCACAAATGACAGCCATGCTTGCTATGACCCAGCACCGTCGTGGGAAGGTCCCTATTATGTTGCACAATGAAAGTGAACGAGCAAGGTCGTGGAGTCAAGTTTTTAGTGAAGATACAAAAAAACAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGGGAACTGCAAGGTCTCAATAAGCAAGAGACAGCCGACAGATATGGAAAAGAGCAAGTACATGAGTGGCGCCGGAGTTATGACATACCTCCTCCAAATGGTGAAAGCTTGGAAATGTGTGCCCAAAGAGCAGTTGCCTATTTCAGAGACCAAATTGAACCACAACTTTTATCTGGAAAGAATGTTATGATTTCAGCCCATGGGAATTCATTGAGATCCATTATCATGTACCTTGATAAATTAACTTCCCAAGAGGTCATTAGTTTGGAACTGTCAACTGGAATTCCCATGCTTTACATTTTCAAAGAGGGAAGATACATTAGGAGGGGAAGTCCCACAAGGCCTTCTGAAGCTGGAGTTTATGCCTATACAAAGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGACATGTTCCAATGA 1038 0.4258 MAAEVYYQAIGTVQSHSHLNNLNRHQKHQNNIVRLVARDFISGNGLSRRSTNRSGRRNCTVIRSLASQTSVVDPVLSPSRSNAGDSNKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDVIFTSALIRAQMTAMLAMTQHRRGKVPIMLHNESERARSWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAQRAVAYFRDQIEPQLLSGKNVMISAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRYIRRGSPTRPSEAGVYAYTKRLALYKQKLDDMFQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01624 345 Pfam Histidine phosphatase superfamily (branch 1) 175 297 IPR013078 -
Vian4g01624 345 Pfam Histidine phosphatase superfamily (branch 1) 95 166 IPR013078 -
Vian4g01624 345 CDD HP_PGM_like 95 310 IPR013078 -
Vian4g01624 345 Gene3D - 84 325 IPR029033 -
Vian4g01624 345 SUPERFAMILY Phosphoglycerate mutase-like 95 311 IPR029033 -
Vian4g01624 345 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 97 106 IPR001345 GO:0003824
Vian4g01624 345 PANTHER PHOSPHOGLYCERATE MUTASE 87 331 IPR005952 GO:0006096|GO:0016868
Vian4g01624 345 SMART PGAM_5 94 280 IPR013078 -
Vian4g01624 345 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 92 319 IPR005952 GO:0006096|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01624 Vian-Chr4 31968586 31971353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01624 K01834 - gmx:100802621 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01624 4 31968586 31971353 Vian4g01624 4 31968586 31971353 ECH