Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01622 ATGATGAACATCACACCCATCATCAACGGCCCAGATTCACTCCTCGGTTTTAGGTTCTTGTTTTATTCATCTCCCCAAGCCTCGCCGTTTTCCTCTCCACCTACTTGTAACCTGCTCCCATACCCTTTCTTACTTCTCTCCCCCCTCTTCCACTCAGTTACACAGTATCCCAATTTTCTAAACCCACAAAGACAAAAAAAAAAAACTTATAGTAGTAATAATAATAATTACAAGATGTTGTTAGGGAAGAGACCTCGTCCTCCAATGAAGAGAACTACCAGCATGTCAGAGATAACCTTCGATCTCAACACAACCTTGGACGACGATGACCAAAACAACCCCGTCAAGGGAGGACTTGGGCCGGACCCATGGACGAAGCACCCACCGCCAGTTGGGTCGAACGGCTTAGATCAGAGCCGGGTTTGGGCCTTGGTTTCACCCAGAAACCATAGAAGGCATTCGGAAGATTCCGCACACACCCCTGAGTTTTTGCGCGTTTGCTTTCTCTGCAAACGCCGTTTAGTTCCTGGTCGTGACATCTACATGTACAAAGGTGACAGTGCTTTCTGCAGTTCAGAATGCCGAGAAAAACAGATGAAGCAGGATGAGCGAAAGGATAATAATAAGTGTGGTGTGGCATCAAAGAAACAAGTTGCAGCTACAGCTACGCCTTCTGGGTCTCAAGTTAGAAGTACCAAAGGCGAAACCGTTGTTGCCTTGTAG 723 0.4675 MMNITPIINGPDSLLGFRFLFYSSPQASPFSSPPTCNLLPYPFLLLSPLFHSVTQYPNFLNPQRQKKKTYSSNNNNYKMLLGKRPRPPMKRTTSMSEITFDLNTTLDDDDQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVWALVSPRNHRRHSEDSAHTPEFLRVCFLCKRRLVPGRDIYMYKGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVAATATPSGSQVRSTKGETVVAL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01622 240 MobiDBLite consensus disorder prediction 218 234 - -
Vian4g01622 240 Pfam zinc-finger of the FCS-type, C2-C2 155 205 IPR007650 -
Vian4g01622 240 ProSiteProfiles Zinc finger FLZ-type profile. 162 206 IPR007650 -
Vian4g01622 240 MobiDBLite consensus disorder prediction 62 90 - -
Vian4g01622 240 MobiDBLite consensus disorder prediction 201 240 - -
Vian4g01622 240 MobiDBLite consensus disorder prediction 62 79 - -
Vian4g01622 240 MobiDBLite consensus disorder prediction 103 137 - -
Vian4g01622 240 PANTHER FCS-LIKE ZINC FINGER 5 79 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01622 Vian-Chr4 31923122 31923925 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01622 - - var:108331042 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01622 4 31923122 31923925 Vian4g01622 4 31923122 31923925 ECH