Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01611 ATGGGAGTGCAAGGCACTTTGGAATACTTCTCCGACTTACTCAGCAACACCAAGAAGAAGAAGAAGAAGAAGCAAATGCAAACTGTAGCTCTGAAAATCAGAATGGACTGTGAAGGATGTGCACGGAAGGTTAAGCATGTTCTTTCTGATGTTAAAGGTACTTCTTCTTCCCTAATCCTGCGATCATTTATTTATGTTATATTTTATCTGTTTCACTTCTTCAAGTTGTTTCGTAAATGGAAAATTGAACAACTGATGAGAATAGGAGCTAAATCGGTGGAAGTGGACTTGAAGCAGCAGAAAGCAACGGTGACAGGGTATGTTGAGGCAAAGAAAGTTCTTAAGGCTGCTCAATCTACTAAGAAGAAGGTTGAACTGTGGCCATACGTACCGTATACTATGGTGGCTAACCCTTATGTTTCTCAGGCCTACGATAAGAAGGCACCTCCTAATATGGTGAGGAAGGTGGCTGACACTGCCAACTTGTCAGAAACCACCGTGGACGACCGCTACATACAAATCTTCAGTGATGAAAACCCAAATGCCTGCTCTATCATGTAA 561 0.4207 MGVQGTLEYFSDLLSNTKKKKKKKQMQTVALKIRMDCEGCARKVKHVLSDVKGTSSSLILRSFIYVIFYLFHFFKLFRKWKIEQLMRIGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYVSQAYDKKAPPNMVRKVADTANLSETTVDDRYIQIFSDENPNACSIM 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01611 186 CDD HMA 35 125 IPR006121 GO:0046872
Vian4g01611 186 SUPERFAMILY HMA, heavy metal-associated domain 89 128 IPR036163 GO:0046872
Vian4g01611 186 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 28 184 IPR045181 GO:0046872
Vian4g01611 186 SUPERFAMILY HMA, heavy metal-associated domain 24 56 IPR036163 GO:0046872
Vian4g01611 186 Gene3D - 23 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01611 Vian-Chr4 31706808 31707368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01611 - - gmx:100782955 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01611 4 31706808 31707368 Vian4g01611 4 31706808 31707368 ECH