Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01605 ATGATGAACCAAGGTGTTGAGAACTTGCGGGTGGATGATTTGGTAACTGATCAGAAGAAACAGTCAAAGGAGGCGGAGGGTCAGAATATTGATCATGATGGCCCCGAGTTTGATGATATATTAGATGCGGATGATGTAAGGTCTAAGAGGAACGACGAGAGCAGGGAATTGCAATCTCGAACTCAACTGGAAAACTTGGAAACCAAATCTGAAACTGAAAGTATTACTGATAGGCAAGAGGATTCTTGTGATAAGACGAGTGCTGGTGGAGATTTGGAGTTCAGAAACCAAGAAACAAATCTAGATGGTAATTCTGGACGGAGTGGATTGGCTAAAGAAGTGGATGATAAGGAATCCAAGCAGATGTTTGATAAGTCAGATGAAATTCCGAGCGAGGACCCCAATTTGGAGCCTGTTTTTGATGGAACAGAGGTTCCAGGGATGGAAGCTAACCGCAGTATGTCTGGCCGTAGGTTGGATGCAGATCAGGACTCCCCAGGTGTGGTTGAGAAGGCTGTGGCTCTTAAGAATTTTGTTAAGGAGAGGAGTGCGGTGGCAGTCTCCACAATGATGCGTCGCCTTTCTGGAAAAAAAGATGAAGGTGCTGTGGACAATGTTGATGACGAAGGTAAGTATGTATCAGATTTTGGAAAAGTTGGTGAAAACAAACTGGTGTCTGAGAAGGCAGTGGAGAAATTTGACTGGAATCCCTTAAATTACATCAAGAAGTCATCCGATGCTGGTGTGGAAAACAAAACTGAGCAGAGAGATTCAATAGTCATGAAAGGAAGGATTATATTGTACACGAAACTAGGTTGCCAAGAATCTAACGAGATTAGGCTGTTTTTGCGTTTGAAAAGACTTAGATACGTCGAAATCAACGTAGATGTGTTCCCTGGTAGAAAGAAGGAGCTGGAGAGGATTTCTGGATCTACTTCTGTACCTAAGGTTTTTTTCAATGAAATACTTATTGGAGGCTCGAGTGAGTTGAAGACTCTAGATGAGTCTGGCAAGCTTGATGAGAAGGTTGACTTTCTAATTACTGAAGCACCATTATTTGAGGCCCCATCGCCACCTCTTTCTGGAGAGGATGATGTGCCGAGTGGTGGACTACCTGATGAAATGGCAATTATTGTCCGCAAAATGAAAGAATCCATAGTTGTGAAGGACCGCTTGCATAAAGTGCGCAGATTCACGAACTGTTTTCTTGGCTCCGAAGCTATCGACTTCTTATCAGAAGATCAGTATTTGGAAAGGCCAGAGGCTGTTGAGTTTGCACGAAAGCTTGCCGAAAAACACTTTTTTCGACATGTTACTGATGAAAATCTATTTGAGGATGGAAACCACCTGTATCGGTTTTTGGATGATGAGCCCATTGTGGTGTCACAATGTCACAACATTTCTAGAGGCATAAGCACCTTGAAGCCCAAGCCTTTACCGGAAATTGCGTCAAGACTAAGGTTTCTGTCCGGTGCAATATTTGAAGCCTATGCTTATGAAGATGGACGTCGTCTTGATTATACTAGTATACATGGAAGTGAGGAGTTCGCAAGGTATCTGAGAATTGTGGAAGAGCTCCAGAGAGTGGAAATATCGGATTCGTCTAGAGAAGAGAAGCTTGCGTTCTTTATTAATCTTTATAATATGATGGCCATCCATGCAATCTTAGTGTTGGGCCATCCAGATGGAGCACTGGAAAGAAGGAAATTATTTGGGGAGTTCAAATATGTTATTGGTGGGTCTACCTACTCACTTTCAGCTATTCAAAATGGCATATTGCGGGGAAACCAGCGACCACCATATAACCTTAAGAAGCCATTTGGGGCAAAAGATACACGCTCGACAGTGGCACTTCCTTACCCTGAGCCTCTAATTCATTTTGCTTTGGTATATGGTACCCGATCTGGGCCTGCACTTCGGTGCTACACTCCTGGAAAGATTGATGAAGAGTTATTGGATGCAGCCCGTAATTTTTTGAGAAATGGAGGCGTTGTAATTGATTCGAGTGCAAAGGCCGTCAATGCTAGTAAGATCCTTAAATGGTACAGTATAGATTTTGGCAAGAACGAGGTAGAGGTGATAAAGCATGTTTCAAACTACTTAGATCCAGCTGACTCTGAAGTATTGTTGGACCTACTTGCTGCTTCCGAGTTGAAGGTGACATATCAGCCGTATGACTGGGGTTTGAACTGCTAG 2196 0.4317 MMNQGVENLRVDDLVTDQKKQSKEAEGQNIDHDGPEFDDILDADDVRSKRNDESRELQSRTQLENLETKSETESITDRQEDSCDKTSAGGDLEFRNQETNLDGNSGRSGLAKEVDDKESKQMFDKSDEIPSEDPNLEPVFDGTEVPGMEANRSMSGRRLDADQDSPGVVEKAVALKNFVKERSAVAVSTMMRRLSGKKDEGAVDNVDDEGKYVSDFGKVGENKLVSEKAVEKFDWNPLNYIKKSSDAGVENKTEQRDSIVMKGRIILYTKLGCQESNEIRLFLRLKRLRYVEINVDVFPGRKKELERISGSTSVPKVFFNEILIGGSSELKTLDESGKLDEKVDFLITEAPLFEAPSPPLSGEDDVPSGGLPDEMAIIVRKMKESIVVKDRLHKVRRFTNCFLGSEAIDFLSEDQYLERPEAVEFARKLAEKHFFRHVTDENLFEDGNHLYRFLDDEPIVVSQCHNISRGISTLKPKPLPEIASRLRFLSGAIFEAYAYEDGRRLDYTSIHGSEEFARYLRIVEELQRVEISDSSREEKLAFFINLYNMMAIHAILVLGHPDGALERRKLFGEFKYVIGGSTYSLSAIQNGILRGNQRPPYNLKKPFGAKDTRSTVALPYPEPLIHFALVYGTRSGPALRCYTPGKIDEELLDAARNFLRNGGVVIDSSAKAVNASKILKWYSIDFGKNEVEVIKHVSNYLDPADSEVLLDLLAASELKVTYQPYDWGLNC 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01605 731 SUPERFAMILY Thioredoxin-like 253 343 IPR036249 -
Vian4g01605 731 Gene3D - 374 490 IPR036388 -
Vian4g01605 731 ProSiteProfiles Glutaredoxin domain profile. 253 350 - -
Vian4g01605 731 MobiDBLite consensus disorder prediction 109 132 - -
Vian4g01605 731 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 386 453 IPR000591 GO:0035556
Vian4g01605 731 CDD DEP 374 452 - -
Vian4g01605 731 SMART DEP_3 382 455 IPR000591 GO:0035556
Vian4g01605 731 MobiDBLite consensus disorder prediction 12 88 - -
Vian4g01605 731 SUPERFAMILY "Winged helix" DNA-binding domain 376 459 IPR036390 -
Vian4g01605 731 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 44 731 - -
Vian4g01605 731 Pfam Protein of unknown function, DUF547 533 659 IPR006869 -
Vian4g01605 731 MobiDBLite consensus disorder prediction 1 146 - -
Vian4g01605 731 Gene3D Glutaredoxin 260 345 - -
Vian4g01605 731 ProSiteProfiles DEP domain profile. 382 455 IPR000591 GO:0035556
Vian4g01605 731 MobiDBLite consensus disorder prediction 92 106 - -
Vian4g01605 731 Pfam Glutaredoxin 265 321 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01605 Vian-Chr4 31620708 31623922 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01605 - - gmx:100820242 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01605 4 31620708 31623922 Vian4g01605 4 31620708 31623922 ECH