Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01600 ATGATTTTTTTATTAATAACCTCTTCTCTTCATTCACGTCTTCCACTACCTAGAAGAAAGGGTTTTGTTCTTATAACTCGAATTGGCACCGATTGCAGACACCAGTTTCGATCTATTTCGTTTCCAAACCCTAATTGCAAGCCCCGTTTGCCGTCGCCGTTTCTGTACTCTACGATCGGTTCTTGGGGTTCGAATCCATGGTTTCGCGTGAATCAGAGGAGAACCGTGGCCAAGGCATCGAATTGGGCTGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGAGGAGCGGATAAAAATTGCTTACAGACGCTTGGCCAAATTTTATCATCCAGATGTCTATGATGGCAGAGGTAACCTTGAAGAAGGTGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGGAGAGAGCCGAAGACAGTATGATATCGATAACCGGGTCAACCCTATGAAGGCATCTCAGGCATGGATGGAGTGGCTTATAAAAAAGCGTAAAGCTTTTGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAACAGCAACAGCGCGAGTTAAATCTTCGTGTGCGTCAACTTTCTCGTTCAAAGACTGATCCTGATGAAGCTAGGAGGATTCTGGCAAGAGAAAAGAAGGCATCGGCCGATTATTACTCAAATACCCTTAAAAGGCACACACTTGTACTAAAGAAGAGAGATTTGATGCGAAGAAAGGCCGAGGAAGAAAAGAAGAAGACTATCAGCCGTCTCTTGGCAGCAGAAGGTCTTGAACTTGATGATTCAGATAGTGATGAGGCACTCTAG 843 0.4389 MIFLLITSSLHSRLPLPRRKGFVLITRIGTDCRHQFRSISFPNPNCKPRLPSPFLYSTIGSWGSNPWFRVNQRRTVAKASNWAEQKSPYETLELEGDADEERIKIAYRRLAKFYHPDVYDGRGNLEEGETAEARFIKIQAAYELLIDGESRRQYDIDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKTDPDEARRILAREKKASADYYSNTLKRHTLVLKKRDLMRRKAEEEKKKTISRLLAAEGLELDDSDSDEAL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01600 280 ProSitePatterns Nt-dnaJ domain signature. 135 154 IPR018253 -
Vian4g01600 280 SMART dnaj_3 86 150 IPR001623 -
Vian4g01600 280 SUPERFAMILY Chaperone J-domain 34 154 IPR036869 -
Vian4g01600 280 CDD DnaJ 88 147 IPR001623 -
Vian4g01600 280 ProSiteProfiles dnaJ domain profile. 87 158 IPR001623 -
Vian4g01600 280 PANTHER CO-CHAPERONE PROTEIN DJLA 71 272 - -
Vian4g01600 280 Pfam DnaJ domain 88 155 IPR001623 -
Vian4g01600 280 Gene3D DnaJ domain 72 173 IPR036869 -
Vian4g01600 280 FunFam Chaperone protein dnaJ 73 178 - -
Vian4g01600 280 PRINTS DnaJ domain signature 107 122 IPR001623 -
Vian4g01600 280 PRINTS DnaJ domain signature 176 195 IPR001623 -
Vian4g01600 280 PRINTS DnaJ domain signature 89 107 IPR001623 -
Vian4g01600 280 PRINTS DnaJ domain signature 130 150 IPR001623 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01600 - - vra:106762321 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01600 4 31578613 31581502 Vian4g01600 4 31578613 31581502 ECH