Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01598 ATGGCGGAAAGTTTGGAACGTATTGACGTGAAGCTGTCTCCTGCGCCGGACGCAAGGATGCCGTTGATGAAATCAAAAGGAGGACGGCGGCAAGGGGACACGTGGGTGGTTTCAGTGTTCGTGATAATCCATATCGGAGTTTTCATTGCAACCATGCTCGTCAACGATTGCTGGACCAATTCTCACGGAGATTGCCTTCTGCAAACCCTCGGAAGGTTCTCCTTCCAGCCTCTCCCCGAGAACCCACTCCTAGGTCCTTCTCAGTCCAAGTTAGATGAAATGGGAGCTCTTCGATGGATCCTTTTGACAGAGCAGCACCAAACTTGGCGTCTTTTCACATTTCCATTTTTGCATGGTGGACTCTTTCACCTGCTACTCAATCTCTCAAGTATCGTCTACGTGGGAGTTCGCCTAGAGCGCGAATTTGGACCCATAAGGATTGGTATAATCTATGCATTGTCAGCTTTTGTGGGAGGCTTGGTGGCTTCTCTTTTTCTCCGAAACACCCCTGCTGTTGGTGCTTCCGGTCCTTTATATGGATTACTGGGAACATTGCTTTCCGAACTTATTTCGGCAATAGCAACATTAGTCTTTGTCTTTGTGTGCAACTTCGTCCTTGGTTTTCTGCCTTATGTAGACAATTTTGCCAGCACTGGAGGTTTTATATCAGGATTCCTTCTTGGATCTGTTTTTCTACTCAGCCCTCAGCTCCAACCAGTAGCTCCAAATAAAGGTGGTATTGTTGAGTATGGTGTCAAAAGTTACATCAACTTAAAGTTGAAGAAAAAGCTGGACAGACCGGTTCTCAGGATTGTTTCTCTTATCCTCTTCGGCCTATTATTGGCTGGTTGTCTTGTGGTAGTTCTTCATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTGGACTGTATCCCTTTTACAAGCTGGCACTGCAAAGACACAGAAGCCTCTTACAATGGTGAGCAATGCTCAGCTGACAATGACCTGTATAGGGAATGGCAACTTCAGGCTGTTAGTGAGTATGCTCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCCGCATTCGCTGTTTAAGGATCACCAAGCCACGGTCTATAAAGTGA 1116 0.4776 MAESLERIDVKLSPAPDARMPLMKSKGGRRQGDTWVVSVFVIIHIGVFIATMLVNDCWTNSHGDCLLQTLGRFSFQPLPENPLLGPSQSKLDEMGALRWILLTEQHQTWRLFTFPFLHGGLFHLLLNLSSIVYVGVRLEREFGPIRIGIIYALSAFVGGLVASLFLRNTPAVGASGPLYGLLGTLLSELISAIATLVFVFVCNFVLGFLPYVDNFASTGGFISGFLLGSVFLLSPQLQPVAPNKGGIVEYGVKSYINLKLKKKLDRPVLRIVSLILFGLLLAGCLVVVLHGININSYCTWCPYVDCIPFTSWHCKDTEASYNGEQCSADNDLYREWQLQAVSEYAPAAAAAAAAAATRIRCLRITKPRSIK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01598 371 Gene3D - 29 234 IPR035952 -
Vian4g01598 371 Pfam Rhomboid family 104 234 IPR022764 GO:0004252|GO:0016020
Vian4g01598 371 SUPERFAMILY Rhomboid-like 32 236 IPR035952 -
Vian4g01598 371 PANTHER RHOMBOID-RELATED 22 314 IPR002610 GO:0004252|GO:0006508|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01598 Vian-Chr4 31563816 31567168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01598 - - gmx:100793747 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01598 4 31563816 31567168 Vian4g01598 4 31563816 31567168 ECH