Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01592 ATGAAGGCTCGCACCCCTACCAAAATCTCTGCATCGTGGATTCCCATTTTCTCTGTCTTTTCCTTCATTCTTGGTATGCTCATCACAAGCAGGATGTGGGACCCACCTGAATCAAACGGGATGCTTATTGCGCAGCATCAGCAGGACCAACAGCTGCAAGTGATCTCAGGGGACTGCGCGACCAAGAAGATGCAGCCCAAGGATGCAGTGAGCGAGTTACAGAAGACCCATGAAGCCATCCAGGCTTTAGACAAACAAGTTTCCATGCTTCAGATGGAGCTAGCAGCAGCTAGGAGTTCTCGTGAAAATGGGATCTCTGATTCGAATACTTCAACCACCACTTCCGAGGAAGGTTCTGCAAGGAAGAAGGCATTTATAGTGATTGGCATAAACACGGCTTTCAGTAGCAGGAAGAGGCGTGATTCAGTAAGAGAGACTTGGATGCCTCAAGGTGAACAACTTCTTCAGTTGGAACGGGAGAAGGGAATTGTTATCAGGTTCATGATTGGCCACAGTGCAACTTCCAACAGCATACTAGATCGAGCTATTGATTCAGAAGAAGCTTTGCACAAAGACTTTCTTCGCCTAGAACATGTTGAAGGGTATCACGAGCTGTCTGCAAAAACAAAGATTTTCTTTTCTACCGCAGTTGCAAAATGGGATGCTGATTTCTATGTCAAGGTTGATGATGATGTCCATGTTAATTTAGGTGTCCTGGCAACAACCCTTGCTCGTCACCGCTCAAAACCCAGGGTCTACATTGGGTGTATGAAATCAGGGCCTGTCCTTTCCAGAAAGGATGTCAAATACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGAAACAAATACTTTCGACATGCAACTGGGCAGATATATGCAATCTCTAAAGATCTGGCCACTTACATTTCCATCAACCAGCCTATTTTGCATAAGTATGCCAATGAAGATGTCTCGCTTGGTGCATGGTTCATTGGTCTTGAAGTTGAGCATATTGATGACCGCAGTATGTGCTGTGGAACTCCTCCAGACTGTGAGTGGAAGGCACAAGCAGGTAACATTTGCGTTGCCTCATTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTCCACTCAAAGTGTGGAGAAGGGGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1182 0.456 MKARTPTKISASWIPIFSVFSFILGMLITSRMWDPPESNGMLIAQHQQDQQLQVISGDCATKKMQPKDAVSELQKTHEAIQALDKQVSMLQMELAAARSSRENGISDSNTSTTTSEEGSARKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEALHKDFLRLEHVEGYHELSAKTKIFFSTAVAKWDADFYVKVDDDVHVNLGVLATTLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGAWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01592 393 Pfam Galactosyltransferase 138 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian4g01592 393 Pfam Domain of unknown function (DUF4094) 10 100 IPR025298 -
Vian4g01592 393 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 84 334 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian4g01592 393 MobiDBLite consensus disorder prediction 98 118 - -
Vian4g01592 393 Coils Coil 73 100 - -
Vian4g01592 393 Gene3D - 113 339 - -
Vian4g01592 393 MobiDBLite consensus disorder prediction 101 118 - -
Vian4g01592 393 FunFam Hexosyltransferase 118 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01592 Vian-Chr4 31495225 31499257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01592 9 393 Glycosyltransferase AT1G77810 72.423 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01592 K20855 - gmx:100776715 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01592 4 31495225 31499257 Vian4g01592 4 31495225 31499257 ECH
Vian7g00234 7 7211363 7214971 Vian4g01592 4 31495225 31499257 PCT