Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01571 ATGAGTCAACCTGGTATTCAGTCGGGTGTTCAACGCGGTTTAAGTGGGGGTTCTTCAATCAGAAGACGTTCATTAAGCATATCAAGTCACGTAAGTTATCATATAGAAAATGATGGTGAGAATGAGAGCGTTTCAGAGGCTGGAGACATTGGAGATAGAGCTCTTGGAAGCAGGAGGTTTAGTGAGAGCAACAGTTTCCGTTTGTCCTTTAACAACAGGTCAGAAAAAGAAGCTGTTGTTTCCATTCCAGATGAACACAGATCGCATCCCAATTCCTCTGTTGGGCCTTTGGCTCCTGTCTTCACATCCCTTTCCCCACTTTCCACTGATGGAATTGTAGGTTTTGAAGACACAGAACATGACCCTCCTAAAGGTTTGCCAGAGTTGCTGGACTATACTTCGTGTTTGGTTCATTTGGCGGTTTTTGGAATTCTTGGGGTCTTGACGAGATATTTACTGCAGAAGTTATTTGGCCCTGGGGTTGCCCATGTGACAAGCGACCAAACCATTCTTTATGTTGATCTTCCTTCTAATATGATTGGTTCGTTTCTTATGGGTTGGTTTGGTGTGGTATTCAAAAGAGACATATCTCAAGTGTCAGAGCATCTATCTATAGCAATAACAACTGGTTACTTAGGAAGCCTTACAACCTTCAGTGGTTGGAATCAAAAAATGCTTGAACTCAGTGTTTCCGGGCATTGGCTCTTCGCTTCACTTGGCTTTATATTAGGTTTATTTCTCGTTGCCTATTCCATCCAGTTTGGGATTGAAACTGCCAAGGGTTTTAGGTGGCTCCTCCACCGGCTGGGTATTAGTTCGGGAAAAGATGTTAATAAGATAAACTGCAGACTAGAGAGCTACCATCGTCAGTTGATAGTTATGGTGATGTTCATGGTCATACTAGGCATATTGTGGGGTGTAAGTGGTGCATTAGTAAAAGCTGAGTTCAAGCACGGTGGTAATTCTGCACAGTTATGGTTTGCTTGCATGGTTGGACCCATGGGTGTGTGGATTAGATGGTTCTTAGCAAGGTTAAACGGGCGTGGATTGGGAAAGGAAGGGTTGTTTAAATGGATTCCATTCGGGACTCTAATTGCCAATGTATCAGCAGCTTGTATTATGGCTGCACTTGCCAGTGTGAAGAACGCAGTGAACACCAGAGATTGTGATACTGTTGTAGCAGGAATACAGTTTGGCCTAATGGGGTGCTTGAGCACTGTCTCTACTTTTGCTGCTGAGTTCAATGCAATGAGAGAAAGCAGTCATCCTTGGAGAGCCTATGCCTATGCCGTTATCACAGTTTGTGTTTCATTCTCTTTGGGAATACTAATATATTGCATCCCTGTCTGGACAAAGGGGCTTTGA 1365 0.4359 MSQPGIQSGVQRGLSGGSSIRRRSLSISSHVSYHIENDGENESVSEAGDIGDRALGSRRFSESNSFRLSFNNRSEKEAVVSIPDEHRSHPNSSVGPLAPVFTSLSPLSTDGIVGFEDTEHDPPKGLPELLDYTSCLVHLAVFGILGVLTRYLLQKLFGPGVAHVTSDQTILYVDLPSNMIGSFLMGWFGVVFKRDISQVSEHLSIAITTGYLGSLTTFSGWNQKMLELSVSGHWLFASLGFILGLFLVAYSIQFGIETAKGFRWLLHRLGISSGKDVNKINCRLESYHRQLIVMVMFMVILGILWGVSGALVKAEFKHGGNSAQLWFACMVGPMGVWIRWFLARLNGRGLGKEGLFKWIPFGTLIANVSAACIMAALASVKNAVNTRDCDTVVAGIQFGLMGCLSTVSTFAAEFNAMRESSHPWRAYAYAVITVCVSFSLGILIYCIPVWTKGL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01571 454 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g01571 454 PANTHER FLUORIDE EXPORT PROTEIN 1-RELATED 121 453 IPR003691 GO:0016020
Vian4g01571 454 Pfam CrcB-like protein, Camphor Resistance (CrcB) 327 443 IPR003691 GO:0016020
Vian4g01571 454 Pfam CrcB-like protein, Camphor Resistance (CrcB) 138 247 IPR003691 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01571 Vian-Chr4 31161578 31164667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01571 K06199 - gmx:100815204 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01571 4 31161578 31164667 Vian4g01571 4 31161578 31164667 ECH