Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01566 ATGGGTCCAGTTCAAACCGTACTTGAAAACGTAAGAAGAATAGAAGGAAGACCCGGTGTAGCACGGCGGAGCAAGGCGAGGCTTGGCAGGCGAGAACGCAACGACGGAGAAGATACAAGAAGAGGCGTGGATTCACCTGCAGTTAATCCGCTTCTCATCAATAAGTCTGTTGCGAAGCGCTTAGAGAAGTTCCAAAAATCCAGGGAAACAATTAACAACCTGAAAGATGGAATCATAAACCTTGGACGAGGCTTTCCGAACTTTGATGGTCCAGAGTTTATAAAGGAAGCAGCAATTCAAGCAATAAGGGATGGGAAAAATCAGTATGCACGAGGTTCTGGAGTTCCAGAGTTGAACATTGCTATTGCTGATAGATTTAGGAAAGATACTGGATTACCGATAGACCCTGATAATGAAGTTACTGTCACAAATGGGTGCTTGGAAGCATTTGCCGCAACTGTGCTAGGATTAATAAATCCCGGCGATGAGGTTATTCTCTTTTCTCCTTTATATGATTCTTATGAAGGTAATTTAGCCATGGCTGGTGCAAAAATAGTAAGCATCCCTCTGCAAGCTCCAAATTTTGCTATCCCCATTCAAAAACTGAAGTCCATTGTGTCAAGGAGTACACGTGCCATTGTTATAAATACTCCTCACAACCCTACCGGAAAGATGTTCTCTCTGGGGGAGCTCAATGCCATTGCATCCCTTTGCATTGAGAACGATGTTCTAGTTTTTGCTGATGAAGTTTATCATAAGTTGGCATTTGATGTGGAGCACATTTCTATAGCTTCTTTGCCTGGAATGTTTGAAAGGACCGTGACAATGAACTCATTGGCAAAGACATTTAGCTTAACAGGATGGAAGATTGGTTGGGCCATAGCACCCTCACACCTGACATGGGGGCTGCGACAGGCGCATTCTTTCATCACTTTCTCAAACGCCACTCCTTTGCAGTGTGCAGCTGCAGTAGCTCTCAGGGCACCAGAGTCTTATTATGTGGAGCTGAAGAGGGATTATAGGGCAAAGAGGGCTATTTTGGTTGAAGGATTAAAGGCAGTTGGCTTTAAGGTATTCCCACCCGATGGAACATTCTTTGTTTTGGCAGATCATACCCCTTTTGGATTGGAAAATGATGTTGCATTTTGTGAATATCTGCTTAAGGAGGTGGGGGTGCTGGCAATTCCTTGCAGTGTGTTTTGCTTGAATCCCGAAGAGGGAAAGAACCTAGTCAGATTTGTTTTCTGCAAGGATGATGAAACTCTTAGGGTCGCGGTTGAGAGGATGAAGGAGAAGCTTAGGAAATGA 1308 0.4419 MGPVQTVLENVRRIEGRPGVARRSKARLGRRERNDGEDTRRGVDSPAVNPLLINKSVAKRLEKFQKSRETINNLKDGIINLGRGFPNFDGPEFIKEAAIQAIRDGKNQYARGSGVPELNIAIADRFRKDTGLPIDPDNEVTVTNGCLEAFAATVLGLINPGDEVILFSPLYDSYEGNLAMAGAKIVSIPLQAPNFAIPIQKLKSIVSRSTRAIVINTPHNPTGKMFSLGELNAIASLCIENDVLVFADEVYHKLAFDVEHISIASLPGMFERTVTMNSLAKTFSLTGWKIGWAIAPSHLTWGLRQAHSFITFSNATPLQCAAAVALRAPESYYVELKRDYRAKRAILVEGLKAVGFKVFPPDGTFFVLADHTPFGLENDVAFCEYLLKEVGVLAIPCSVFCLNPEEGKNLVRFVFCKDDETLRVAVERMKEKLRK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01566 435 FunFam Aminotransferase, class I/classII 91 329 - -
Vian4g01566 435 MobiDBLite consensus disorder prediction 18 47 - -
Vian4g01566 435 Gene3D Aspartate Aminotransferase, domain 1 75 429 IPR015422 GO:0003824
Vian4g01566 435 Coils Coil 426 435 - -
Vian4g01566 435 PANTHER FI04487P 57 434 - -
Vian4g01566 435 Pfam Aminotransferase class I and II 78 428 IPR004839 GO:0009058|GO:0030170
Vian4g01566 435 Gene3D - 91 329 IPR015421 GO:0003824
Vian4g01566 435 MobiDBLite consensus disorder prediction 28 42 - -
Vian4g01566 435 SUPERFAMILY PLP-dependent transferases 72 434 IPR015424 -
Vian4g01566 435 CDD AAT_like 79 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01566 Vian-Chr4 31022376 31024749 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01566 K23977 - gmx:100818968 608.216