Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01565 ATGCTAACTTCCCATATATACTCACTCATGAGATTCACGCCTTCATCAAAGTTCTTAGGCTTTTCAAATCACTTCCACAGCGTTATCGCATCCTCTTTTTCTCTAACCTCAAAGTTCCCATCTTCCATTGCTGCCACCATGTCCACTCAGAACGACACCGCCGCCCTCAAAACGCATCAACCTTTGCAAATTGCAAAGCGCTTAGAGAAATTCCAGACAACTATCTTCACTCAAATGAGCTTGCTAGCCATCAAACATAAAGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAGTTTATAAAGGAAGCAGCCATTCAATCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGACCTTAACATTGCCATTTCTGAGAGATTTAAGAAAGATACTGGATTAGTGGTAGACCCTGAAAAGGAAGTTACTGTTACCTCTGGATGCACTGAGGCTATTGCTGCAACTATACTAGGATTAATAAATCCTGGTGATGAGGTTATTATGTTTGCTCCATTTTATGATTCTTATGAGGCCACTTTGTCTATGGCCGGTGCAAAAGTCAAAAGCGTTACTTTGCGCCCGCCAGATTTTGCTGTCCCTATTGAAGAGCTGAAGTCCATCATCTCAAAGAATACCCGTGCCATTCTTATAAATACACCTCACAACCCTACTGGAAAGATGTTCACTCGCGAGGAGCTTGATTGCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAGGTCTATGATAAGTTGGCTTTTGATATGGAGCACATTTCGATGGCTTCTTTGCCTGGAATGTACGAAAGGACAGTGACAATGAATTCCTTGGGAAAGACATTCTCCTTAACCGGATGGAAAATTGGTTGGGCAATAGCACCCCCACATTTAACATGGGGAGTGCGTCAGGCACACGCATACCTCACTTTTGCAACCTCCCATCCTTTCCAGTGTGCTGCTGCGGTAGCTCTGAGAGCGTCAGACTCTTACTATGAAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGGTTGAGGGGTTGAAGGCTGTTGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAGATGATATTGCATTTTGTGAATATCTAGTTAAGGAAGTGGGAGTAGTGGCAATTCCTACTAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTTGTCAGATTCACGTTTTGCAAGGATGAGGGAACTATTAGGTCTGCTGTTGACAGGATGAAAGAGAAGCTTAAAAAATGA 1338 0.4312 MLTSHIYSLMRFTPSSKFLGFSNHFHSVIASSFSLTSKFPSSIAATMSTQNDTAALKTHQPLQIAKRLEKFQTTIFTQMSLLAIKHKAINLGQGFPNFDGPEFIKEAAIQSIRDGKNQYARGYGVPDLNIAISERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVIMFAPFYDSYEATLSMAGAKVKSVTLRPPDFAVPIEELKSIISKNTRAILINTPHNPTGKMFTREELDCIASLCIENDVLVFTDEVYDKLAFDMEHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAYLTFATSHPFQCAAAVALRASDSYYEELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLEDDIAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTIRSAVDRMKEKLKK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01565 445 FunFam Aminotransferase, class I/classII 101 339 - -
Vian4g01565 445 SUPERFAMILY PLP-dependent transferases 63 444 IPR015424 -
Vian4g01565 445 Gene3D - 101 339 IPR015421 GO:0003824
Vian4g01565 445 Gene3D Aspartate Aminotransferase, domain 1 78 439 IPR015422 GO:0003824
Vian4g01565 445 CDD AAT_like 89 441 - -
Vian4g01565 445 Pfam Aminotransferase class I and II 88 438 IPR004839 GO:0009058|GO:0030170
Vian4g01565 445 PANTHER FI04487P 64 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01565 Vian-Chr4 31013006 31015099 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01565 K23977 - gmx:100818968 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01565 4 31013006 31015099 Vian4g01565 4 31013006 31015099 ECH