Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01560 ATGGCGAAGAACACCAACCTAAGCTCTGGAACCCCAAATCCTCTACTCTTGTTCTTATGTTTCACCACTCTCATGCTCCTTCGAACCGAGGCTGTATGGTTAACCATCCCAAGTAAGGGAACTAAGTGCATGTCTGAGGAAATCCAGGCACACGTCGTCGTTTTAGCAGATTACTACGTTGTAGCCGAGGATGGCAAGGGTCACCAACCTCAAACAGTTTCTGTCAAGGTGACATCCCCTTATGGAAATAATCTTCACCAGAATGAAAATGTTACCCATGGTCAGTTTGCATTTACAACTTCGGAGAGTGGGAACTATGTGGCGTGCTTTTGGATGGATACCAAACATCAAGAAGGTGGAGTAGAGACCACAATCAGCCTTGAATGGAAAACTGGAATCGCTGCCAAAGATTGGGACTCCGTTGCAAGAAAGGAAAAGATAGAGGGTGTTGAACTTGAGCTAAGGAAACTTGAAGGGGCCGTGGAAGCCATCCGGGACAATCTAATTTATTTGAAGAATAGGGAAGAGGAGATGAGGGAAGTTAGTGAAACAACAAATGCTAGAGTGGCTTGGTTCAGTATCTTATCTCTTGGCATCTGCATCTGTGTTTCGGTGTTGCAGCTATGGTATCTGAAGCGCTTCTTTCGTAAGAAGAAGCTCATATAG 666 0.4505 MAKNTNLSSGTPNPLLLFLCFTTLMLLRTEAVWLTIPSKGTKCMSEEIQAHVVVLADYYVVAEDGKGHQPQTVSVKVTSPYGNNLHQNENVTHGQFAFTTSESGNYVACFWMDTKHQEGGVETTISLEWKTGIAAKDWDSVARKEKIEGVELELRKLEGAVEAIRDNLIYLKNREEEMREVSETTNARVAWFSILSLGICICVSVLQLWYLKRFFRKKKLI 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01560 221 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 16 218 IPR015720 -
Vian4g01560 221 Pfam emp24/gp25L/p24 family/GOLD 33 216 IPR009038 -
Vian4g01560 221 SMART EMP24_GP25L_2 31 216 IPR009038 -
Vian4g01560 221 Coils Coil 147 174 - -
Vian4g01560 221 ProSiteProfiles GOLD domain profile. 41 156 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01560 Vian-Chr4 30956581 30958117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01560 K20352 - gmx:100500676 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01560 4 30956581 30958117 Vian4g01560 4 30956581 30958117 ECH