Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01551 ATGGCCGAAGACAGTGAGGGGATGAAGAAAGGGGAGAATATAGAGTCTCAGATTGAAACCGCTATGCGCTCTCGCGTCTCTCACTTCAAGGAACAATCCGACTCTCTGACGTTCGAGGGTGTTCGTCGATTGCTTGAGAAAGACTTGGGATTGGAGGAGTATGCTCTGGATGTGCACAAGAGATTTATTAAGCAATGTTTGCTCAAGTCCTTAGAAGGGATCGTTGATGATGATGCCCCAAGGATATCGGAGAAGGCAGGGGAAAATGGTGCAGGTACACAAGAGTCAGAAGAACCAAAAGAAAAGAGTGAATTAAAAGATGAGAAGGATGTTTGCCTTGAAGATGAGGAGAAAATGGAAGACTCTCCTGTGTTAGGTCTTCTTAAAGAACAAAAAAGGGCTAAACTTGAAACCAAGGATGATAAAGGCAATGGAAACAAAGTAGTTCCAAGTGAAGCCCTTATTATGAAAGCTGTTAGAAAAAGATCTTCGTACATCAAGGCTAATGCAGAGTCAATCACTATGGGTGGTCTTCGTCGACAATTGGAGGAAGATCTGAAACTTGATAAATTTACTCTTGATCCCTTTAAGAAGTTTATAAGTCAACAGCTTGATGAGGTATTAGCGTCTTCTGTAGTTTCAGAACCCGCTAAGAATGCTAAGAAAATTGAAAAAAAAAAACCTGATACCAAAGTAACTAAAAAGGTCAGCGGTGAAGAAAACTCTGATTCTTCAGATAAGGAGACTGATGAGGACGGGAGTCAGGAAGATGAAGTTAAACCTAGGAAAAAGGTTGTTCCTAAAGGAAAGGTTAAGACTCCTGTCCAATCCAAAAAACGCAAAGGAGAGGAGACTGATCTGTCCAGTAAGAAAAGGATCAAGCCTGCTAAAGCAGCCTCAGAAGAGATCAGTGATGCAGAGGATAATGGGAAAAACTCTGAAGATGATCAGTCCCATTCATCATCCGAGAAAGCTTCCAAGAAAAAAGAGGTTTCAGCCCCTGTCTATGGCAAACGTGTGGAGCACTTAAAGTCTGTTATTAAAGCATGTGGAATGGGTGTTCCTCCCTCAATTTACAAAAAGATCAAGCAAGTGCCTGAAAACAAACGGGAAGAACAACTAATCAAGGAGTTGGAGGAAATATTGTCTAGAGAAGGTTTATCTTCTAATCCATCTGAAAAGGAAATCAAGGAAGTAAAAAGGAAGAAGGCAAGAGCCAAAGAACTTGAGGGTATTGATGTAAGTAATATTGTTTCAAGTTCTCGTAGAAGGTCAACAAGTAGTTATATAGCTCCTCCACCTCCAAAGCCCAAGGTTCCAGTTGAAACTAGTGGCAACGGGGCTGAAGACGGTGATAATGACGAGGACAATGACAATGAAGAGGATGAAGAAAACGAGGAAGAGGATAGTGGCAGCGATGAAGCTGAGGATGATGGAAGTCAGAGTGAAGAATTTAATGATGACGAAGAAGACAGTGATTGA 1482 0.415 MAEDSEGMKKGENIESQIETAMRSRVSHFKEQSDSLTFEGVRRLLEKDLGLEEYALDVHKRFIKQCLLKSLEGIVDDDAPRISEKAGENGAGTQESEEPKEKSELKDEKDVCLEDEEKMEDSPVLGLLKEQKRAKLETKDDKGNGNKVVPSEALIMKAVRKRSSYIKANAESITMGGLRRQLEEDLKLDKFTLDPFKKFISQQLDEVLASSVVSEPAKNAKKIEKKKPDTKVTKKVSGEENSDSSDKETDEDGSQEDEVKPRKKVVPKGKVKTPVQSKKRKGEETDLSSKKRIKPAKAASEEISDAEDNGKNSEDDQSHSSSEKASKKKEVSAPVYGKRVEHLKSVIKACGMGVPPSIYKKIKQVPENKREEQLIKELEEILSREGLSSNPSEKEIKEVKRKKARAKELEGIDVSNIVSSSRRRSTSSYIAPPPPKPKVPVETSGNGAEDGDNDEDNDNEEDEENEEEDSGSDEAEDDGSQSEEFNDDEEDSD 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01551 493 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 149 209 IPR014876 -
Vian4g01551 493 PANTHER HIRA-INTERACTING PROTEIN 3 1 492 IPR037647 -
Vian4g01551 493 MobiDBLite consensus disorder prediction 276 338 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 390 410 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 382 493 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 448 493 - -
Vian4g01551 493 Pfam Histone chaperone domain CHZ 405 436 IPR019098 -
Vian4g01551 493 Coils Coil 296 316 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 210 338 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 218 243 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 78 148 - -
Vian4g01551 493 SMART CHZ_2 403 438 IPR019098 -
Vian4g01551 493 MobiDBLite consensus disorder prediction 94 146 - -
Vian4g01551 493 MobiDBLite consensus disorder prediction 414 428 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01551 2 83 EF-hand Containing Proteins AT1G44780 39.024 6.03e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01551 - - gmx:100784738 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01551 4 30747952 30753532 Vian4g01551 4 30747952 30753532 ECH