Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01546 ATGGAAGAGAGTTTCGTTTGCCAGTGGAGCGATATCAGATCTCTCTTGTCCATCCTTCAGTGGTGGGCTTTCAATGTCACCGTAATCATCGTCAACAAGTGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTTTCAAGCGTCCACTTTATCTGTTCAGCCATTGGGGGATATGTGGTAATAAAGGTGCTGAAACTTAAGCCACTGATAACTGTTGACCCTGAAGATCGCTGGCGAAGAATCTTTCCAATGTCATTTGTGTTCTGTATTAACATCGTGTTAGGGAATGTGAGCCTACGATACATTCCAGTTTCTTTTATGCAGACAATAAAGTCATTCACACCTGCCACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTGTACCCATTGTTGGAGGGATTCTTCTGACATCTGTAACAGAGCTTAGTTTTAACATGTTTGGATTTTGTGCTGCATTATTTGGCTGTCTGGCTACTTCTACAAAGACTATTCTTGCAGAATCTCTTCTGCATGGATACAAATTTGACAGCATAAACACAGTTTATTACATGGCACCTTTTGCAACCATGATCTTGGCGCTTCCTGCACTGTTACTTGAAGGCAATGGAATCCTTGAATGGTTTGGTACCCATCCATATCCTTGGTCGGCTCTCATCATTATTTTTAGCTCCGGGGTGTTGGCTTTCTGTCTTAACTTCTCAATTTTTTACGTGATACACTCCACCACTGCTGTAACATTTAATGTTGCCGGAAATCTTAAGGTTGCAGTCGCTGTCCTTGTTTCTTGGCTGATATTTAGAAACCCAATTTCATATTTAAATTCTGTTGGATGTGCCGTGACTCTTGTGGGCTGTACATTCTATGGTTATGTGAGGCACATGCTCTCCCAACAGCCAGCAGTCCCTGGAACTCCTCGGACCCCCAGGACTCCAAGGACCCCCCGGAATAAGATGGAGTTGCTTCCTCTTGTAAATGATAAATTAGAAGATAAGGTCTAG 1038 0.4287 MEESFVCQWSDIRSLLSILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSSVHFICSAIGGYVVIKVLKLKPLITVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPALLLEGNGILEWFGTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNSVGCAVTLVGCTFYGYVRHMLSQQPAVPGTPRTPRTPRTPRNKMELLPLVNDKLEDKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01546 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 152 - -
Vian4g01546 345 FunFam UDP-galactose transporter 1-like 47 158 - -
Vian4g01546 345 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Vian4g01546 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 300 - -
Vian4g01546 345 Gene3D - 65 156 - -
Vian4g01546 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01546 Vian-Chr4 30702774 30707237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01546 1 345 Organic Solute Cotransporters AT1G77610 89.017 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01546 K26222 - gmx:100778350 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01546 4 30702774 30707237 Vian4g01546 4 30702774 30707237 ECH