Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01545 ATGAATGCCTATATTTTCGGTATCGTCGTTCCTCTCCTCGTCATCCTCTTCCGCAGCCGCAGTTCCACCAAGCGCCGCGGCCTCCCAGCCGACGTTAGCGGCGAGCGCGGACTCGCGCTGCGGAACCACCGCTTCACTTCGCCACTCAGTTCTGCCTGGGAGGGCGTCACGACGCTGGCGGAGCTCTTCGAGCGCGCATGCAGGGAGCATCATGACCGTGTGCTGCTCGGCACGCGCGTGGAGATCGCGCGTGAAGTGGACTACTCTTATGGTAGAAGACTCGAGAAGCTTCACCTGGGGGACTACCACTGGCTTACTTATGGGAGAGTCTTCGAATCCGTCACGAGTTTCGCTTCTGGTTTGGCGTTGCTCGGTCATCGCAAGGAAGAGCGCGTGGCTATATTCGCTGAAACCAGAGATCGTTGGTTCATTGCACTGCAGGGATGCTTCAGGAGGAATGTGACAGTTGTGACCATATATTCGTCATTGGGAGAGGAAGCTTTGTGTCACTCGTTGAATGAGACAGATGTCACAACAGTGATATGTGGGCGCAAAGAATTGACGTCACTAGTACATATCAGTGGTCAACTTGATTCTGTGAAACGTGTTATATGCATTGACGACGACAAGATTTCATCTGATTTGTTTGCTCAGACTGGATGGAAAATCACTTCCTTTGCTGACGTTGAGAGCCTTGGCAGAGACAATCCTGTTGAGGCTGATTTACCCCTTTCAGCCGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTGCCCAAGGGTGTAATGATGACACATGGCAATGTCTTGGCAACAGTCTCTTCGATAATGATTATAGTTCCTAACCTTGGGCCAAAGGATGTCTATCTTGCCTACTTACCGATGGCTCACATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTAGTATAGGATATGGAACTCCTTTGACTTTAACTGATACATCAAACAAAATAATGAAGGGGAAAAGGGGGGATGCCACTGCATTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGCGAAGGAGTGCTCAATAAGGTAAATGCAAAAGGAGGATTGTCAAAGAAATTGTTTTATTTAGCCTTTGCACGAAGGTTGCTTGCACTTAATGGTAGCTGGTTTGGTGCTTGGGGCTGGGAAAAAGCTCTATGGAATCTTCTTGTGTTCAAGAAGGTTCAAGCAATTTTGGGTGGTCGCATTCGGTTTATACTATGTGGTGGTGCTCCACTTTCTGGTGACACCCAAAGATTCATCAACATTTGTCTTGGTGCTCCAATTGGTCAAGGATATGGTCTCACTGAGACTTGTGCTGGTGGGACATTCTCTGATTTCGACGATACGTCTGTGGGCCGTGTTGGGCCACCTATTCCTTGCTCATATATTAAACTAATTGACTGGCCCGAAGGTGGATATTCAACTAATGACTCGCCCATGCCTCGTGGTGAAATTGTGATTGGCGGTCCAAATGTCAGTCTTGGTTACTTCAAAAATGAAGAAAAAACAATAGAATCTTACAAGGTTGATGAAAGAGGAGTAAGGTGGTTCTACACTGGTGATATCGGAAGATTTCATAAAGATGGTTGCATTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTCCAGCATGGAGAATATGTGTCCTTGGGAAAGGTGGAGGCAGCTCTTTCTACCAGTCCCTACGTCGACAATATCATGTTGCATGCTGACCCTTTTCATAGCTATTGTGTGGCACTCGTCGTAGTTTCTCATCCGGCATTGGAGCAATGGGCTTCACAGCAAGGAATTGCTTATTCTAATAATTTTTCAGAACTGTTCAGGAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTTTAAAGGAAGCAAAGAAGGGTCGTCTGGAAAAGTTTGAGATTCCTGCAAAAATTACTTGCCTTTCTGACCCATGGACTCCTGAAACTGGCCTAGTCACTGCAGCTCTTAAGCTGAAGAGAGAGATAATTAGAAAGGCTTTTCAAGAGGAGCTTTCAAAGTTATATGCCTCCGTCTAG 2088 0.4646 MNAYIFGIVVPLLVILFRSRSSTKRRGLPADVSGERGLALRNHRFTSPLSSAWEGVTTLAELFERACREHHDRVLLGTRVEIAREVDYSYGRRLEKLHLGDYHWLTYGRVFESVTSFASGLALLGHRKEERVAIFAETRDRWFIALQGCFRRNVTVVTIYSSLGEEALCHSLNETDVTTVICGRKELTSLVHISGQLDSVKRVICIDDDKISSDLFAQTGWKITSFADVESLGRDNPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSIMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGSIGYGTPLTLTDTSNKIMKGKRGDATALMPTVMAAVPAILDRVREGVLNKVNAKGGLSKKLFYLAFARRLLALNGSWFGAWGWEKALWNLLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTNDSPMPRGEIVIGGPNVSLGYFKNEEKTIESYKVDERGVRWFYTGDIGRFHKDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSTSPYVDNIMLHADPFHSYCVALVVVSHPALEQWASQQGIAYSNNFSELFRKEETVKEVHASLLKEAKKGRLEKFEIPAKITCLSDPWTPETGLVTAALKLKREIIRKAFQEELSKLYASV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01545 695 Pfam AMP-binding enzyme 99 560 IPR000873 -
Vian4g01545 695 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Vian4g01545 695 Gene3D - 49 552 IPR042099 -
Vian4g01545 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 39 692 - -
Vian4g01545 695 ProSitePatterns Putative AMP-binding domain signature. 251 262 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01545 Vian-Chr4 30684001 30690873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01545 146 693 Acyl Lipid Metabolism Gene Families AT1G77590 75.182 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01545 K01897 - gmx:100778889 1196.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01545 4 30684001 30690873 Vian4g01545 4 30684001 30690873 ECH