Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01529 ATGCCTCCTCATCTGAACTCAATGAATGCCAGCAGCGGCAGGAGCAGCAACCCAATCATGTATTCCAATTCATCTGGGATGCTGAAACCCCCACCAATCGAGAAAAAACTGGAATGCACTCTGGAAGAGTTGTGCTACGGATGCAAGAAAAATATGATGATCACAAGGGATGTCCTCACAGATACAGGGGGAATAGTTCGAGAGGAAGAATTGCTAACGATAAATGTGCAACCTGGATGGAGGAAAGGAACAGAGATTAAATTTGAAGGAAAAGGGAATGAGAGACCAGAAGCATACAGAGAAGATATAGTATTTATTATCTCCGAGAAAAGACACGAGTTATTTAGAAGAGACGGGGATGATTTGGTATTGAGAGTTGAGATTCCCTTAGTAAAGGCACTTTCTGGGTGTACGATATTGATTCCACTGTTGGGTGGAGACCACATGAATCTTAAACTTGACGACATCGTACACCCTGGCTATCAGAAGATCGTCCCTGAACAAGGCATGCCTATCTCCAAAGAACCAGGAAACAGAGGAAACTTGATTGTTACGTTTCGAGTTGTGTTTCCGACACATCTCACAAGTAATCAAAGATCAGAGGTTGTTCGTATTTTACAGGATTCTTGA 630 0.427 MPPHLNSMNASSGRSSNPIMYSNSSGMLKPPPIEKKLECTLEELCYGCKKNMMITRDVLTDTGGIVREEELLTINVQPGWRKGTEIKFEGKGNERPEAYREDIVFIISEKRHELFRRDGDDLVLRVEIPLVKALSGCTILIPLLGGDHMNLKLDDIVHPGYQKIVPEQGMPISKEPGNRGNLIVTFRVVFPTHLTSNQRSEVVRILQDS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01529 209 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 22 207 - -
Vian4g01529 209 Pfam DnaJ C terminal domain 33 191 IPR002939 -
Vian4g01529 209 MobiDBLite consensus disorder prediction 1 27 - -
Vian4g01529 209 SUPERFAMILY HSP40/DnaJ peptide-binding domain 32 113 IPR008971 GO:0006457|GO:0051082
Vian4g01529 209 FunFam DnaJ subfamily B member 13 112 192 - -
Vian4g01529 209 SUPERFAMILY HSP40/DnaJ peptide-binding domain 115 200 IPR008971 GO:0006457|GO:0051082
Vian4g01529 209 Gene3D - 112 192 - -
Vian4g01529 209 Gene3D - 29 111 - -
Vian4g01529 209 FunFam Dnaj homolog subfamily b member 29 110 - -
Vian4g01529 209 CDD DnaJ_C 31 194 - -
Vian4g01529 209 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01529 Vian-Chr4 30532582 30533428 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01529 K09519 - gmx:100782604 323.168