Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01525 ATGGGCTGCGGCGCCTCCAAGGTGGAGGACTTCCCCGCGGTGGCTCTGTGCAGAGAGCGGAAGAGGTTTCTAAAAGCCGCATCGGAGGAACGCTACGCTCTGGCAGCGGCACACGTGGCGTATTTCCATTCGCTCAGGGAAATCGGCGACGCTCTTCGCAAATTCGCGGAACAAGACCTGACTACCACCACCGGTTCTTCCTCTCCGGTTCTCACATTACCTTCCGAAACCAAGAGCATCAACAATAACAAACTTTCATCCTCTTCTGCTTCACTCTCTCACGCAGATTCTCCCGACGGTTCCCACTTGCCTCTCTCTTCTGGATCCGAATTGAGTTCTCCTTCTCCTACTCATTCTCATTCTCATTCTCATTCTCACTCGCATTCTCATTCTTCTTCGCCTCAAATTCATGGTTCCCCAGAACCCGACCCACCTCCATACGGGTACTATCAAAATTACCAATACGCCCATTACATGAAGAGGTCTGTCCCCAATGGAAAACCAATGGTATATGAAGAACCAGAGAAGCACGTCGCAACATTTGGACAATGGCCCGATCCTTCTTACGGTTACGGTTTCTACGGGTTTCCGGGTGGGGATTACCCTTACTACCCTCCCCCGGGACCGTCGTCATCTCCGCCGCGTCCCCCTCCCGCGCCGCCGTCTCCTCCTCGCGTCTCCACTTGGGATTTCCTCAACGTCTTCGATAGCTTCGAGAACGGGTATCCGATTTATCCGCCTCGGTTCGGGTCGAGAGCGAGCAGTCCGGATTCGAAGGAGGTGAGGGAGAGAGAGGGGATTCCCGAATTGGAAGATGAGATGGAGCACGAAGTCCCGAGAGAGGCTCCTGCGAAGGAGAAGGAAGGTAAAAAGGTGGCTGGGGAAAAGGGATCCGCTGGAGTGAGGGATTTCGGGGAAGGTCCTTCGAACACTAAAACGGTCCCGTTGCAGCAGGTGAGTAGCAGCGAGGGGAGTTCCAAGACGGTAAGGTTCCATGACGGGAGCGATAACGGTTCCGTTGAAAAAGAGATTAGGAGCAGTCCCGACACTGTTGTTTCCGAAGAGCATGGTGCGAAGAAAGGGGTGAGCTTCGAGATTGATGAAGCGACGGTCACGACGGTGGAAGGTGACTCTTCCGTTCTGAGTAGTGTAACCACTTTGTCGGCGCACGGAACCAGGGATCTGCGTGAGGTTGTGGTGGAGATTCAGGATGAGTTTGTGACGGCATCGAATTTTGGGAAAGAGGTTGCATTGTTGCTTGAGGTTTGCAAACCGCCTTATCGGTCTAGGGTTGCTGCACTTAGAGTTATCTTGTCCAGAATCTTGCAGATGGTAGCACCTTTGAGGTTACCTTCAGATCCTCCATCTATACAATTTTCTTCTAGGAAAATAAAATTGGCACGAGCATATTGTGGGGAACCTGGGAAAGACTTCAAGACAAATCCAGAAAATCTTTCATCCACATTGGAGAAACTTTATGCGTGGGAGAAGAAATTGTATAAGGAAGTTAAGGATGAAGAGAGGTTACGGGCCATTTATGAGAAAAAGTTCAAGAGACTGAAAACATTGGATAATCTAGGAGCTGAATCTAGTAAAATTGATGCTACTAGAGCATCAATTAGGAAGTTGCAAACAAAAATCAATATTTGCATCAGAACTGCTGAAACTATAATGGGAAGAATACATAAATTGAGGGATAATGAATTGCAGCCTCAACTTGCGGCATTGATTAATGGATTCACGAAAATGTGGAAATTCATGCTCAAATGCCACCAGAAACAGGTCCAAGCTATCATGGAGAGTAAAAGTCAGTCTATTAAGATTAACCTTGGTGTTTCAGGAGATGAAGTTCTGAAGGCCATTGTAGAACTTGAAAAGGAGCTTTTGAATTGGTGCTGTCAGTTCAACATTTGGGTTAAGACCCAAAAAACTTATGTCAAGAATTTGAATGAGTGGCTCTTGAGATGCCTTCCTAATGAACCTGAAGAAACAGCTGACGGTATTGCCCCTTTCTCTCCAAGTCGGCTTGATGCTCCACCAGTTTTTATTATTTGTAATGATTGGCATCAAGCAATGACTAGAATTTCAGAAACGGAGGTGGCAGAGGCCATGCATGAATTTGCTCAAAAACTACATGAGTTATGGGAAAGGCAAGATGAGGTGCAACGCCAGAGAATCAAAGCCGAGTATCTCAGAAAGGACTTTGAGAAACAACTTAGAACATTGCGCACAGAAATGGGAGGCTTAGAACATGATAAAGTTTCAGGAAAGACTGCATTGTCGAAGTTCACTTCTGATAGCGGTGTTTCACCACTAGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAAATTACATGAAGAGAGGGTCAAGCATAAAGAAGCCGTCAAACTTGTTCATGATGCAGCTAATAGTAGTTTACAGGCTGGTTTGATTCCCATTTTTAAGACATTAGAGAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAACAAGTTAGGCTTAAAAATGCTGCTGGGGATTCGTAG 2529 0.4674 MGCGASKVEDFPAVALCRERKRFLKAASEERYALAAAHVAYFHSLREIGDALRKFAEQDLTTTTGSSSPVLTLPSETKSINNNKLSSSSASLSHADSPDGSHLPLSSGSELSSPSPTHSHSHSHSHSHSHSSSPQIHGSPEPDPPPYGYYQNYQYAHYMKRSVPNGKPMVYEEPEKHVATFGQWPDPSYGYGFYGFPGGDYPYYPPPGPSSSPPRPPPAPPSPPRVSTWDFLNVFDSFENGYPIYPPRFGSRASSPDSKEVREREGIPELEDEMEHEVPREAPAKEKEGKKVAGEKGSAGVRDFGEGPSNTKTVPLQQVSSSEGSSKTVRFHDGSDNGSVEKEIRSSPDTVVSEEHGAKKGVSFEIDEATVTTVEGDSSVLSSVTTLSAHGTRDLREVVVEIQDEFVTASNFGKEVALLLEVCKPPYRSRVAALRVILSRILQMVAPLRLPSDPPSIQFSSRKIKLARAYCGEPGKDFKTNPENLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKKFKRLKTLDNLGAESSKIDATRASIRKLQTKINICIRTAETIMGRIHKLRDNELQPQLAALINGFTKMWKFMLKCHQKQVQAIMESKSQSIKINLGVSGDEVLKAIVELEKELLNWCCQFNIWVKTQKTYVKNLNEWLLRCLPNEPEETADGIAPFSPSRLDAPPVFIICNDWHQAMTRISETEVAEAMHEFAQKLHELWERQDEVQRQRIKAEYLRKDFEKQLRTLRTEMGGLEHDKVSGKTALSKFTSDSGVSPLDDLKVDLDSMKKKLHEERVKHKEAVKLVHDAANSSLQAGLIPIFKTLESFTSEVVKAHEQVRLKNAAGDS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01525 842 MobiDBLite consensus disorder prediction 334 356 - -
Vian4g01525 842 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vian4g01525 842 MobiDBLite consensus disorder prediction 310 333 - -
Vian4g01525 842 MobiDBLite consensus disorder prediction 249 356 - -
Vian4g01525 842 MobiDBLite consensus disorder prediction 61 149 - -
Vian4g01525 842 MobiDBLite consensus disorder prediction 255 297 - -
Vian4g01525 842 Pfam Protein of unknown function (DUF632) 395 712 IPR006867 -
Vian4g01525 842 Coils Coil 732 752 - -
Vian4g01525 842 MobiDBLite consensus disorder prediction 61 120 - -
Vian4g01525 842 Coils Coil 772 792 - -
Vian4g01525 842 PANTHER UNCHARACTERIZED 1 835 - -
Vian4g01525 842 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01525 Vian-Chr4 30464566 30469552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01525 393 719 Acyl Lipid Metabolism Gene Families AT2G27090 31.285 9.13e-43 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01525 - - gmx:100782069 1273.46