Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01524 ATGGCTGGTAAAATTGCGATTTGTTCGTCAGTGTTAGTGTTTTTGTTCTTTCTCCTTCTGGCACCCCTTTCTCAAATCTCTGCTCACGAATCGGAGACTCAGGAGTTCGTTCTCACATTGGATCACTCCAACTTTTCCGACACCGTCAAGAAGCATAATCTAATCGTCGTCGTGTTCTACGCACCAAGGTGTGACCGCAGTAAGAAGCTTGCACCGGAGTATGAAAAAGCTGCTTCTATTCTGAGTAGTTATGATCCAGCGGTTGTTTTGGCTAAAATTGACGCGGATGATGAGAAGAACAAAGACCTTGCTACAGAATTTGAAGTTAGGGCTTACCCAACAATTAGGATCCTGAGAAATGGGGGAAAGAATGTTCAAGAATACAAAGGTCCCCGTGAAGCAGATGGCATCGCTGAGTATCTGAAGAAACAAAGTGGTCCTGCTTCAGCTGAAATTAAATCTGTAGATGATGCTACCGCAGTTATTGGTGAAAATAAAGTTGCTATTGTTGGAGTGTTTCCGAAATTTTCTGGGGAGGAGTTTGATAACTTCACTGCGTTATCAGAAAAGTTACGTGCTGACTATGACTTTGGTCACACTCTGAATGCCAAACACCTTCCAAGAGGAGAATCATCAGTTGCTGGGCCCATAGTAAGGTTATTCAAGCCATTTGACGAACTTTTCGTTGACTTTCAGGATTTTCATGTGGAAGCTCTAGAGAAATTTGTCGAAGAATCTAGTGTGCCTGTTGTGACTGTCTTTAACAGTGAACTGAGAAATCACCCTTTTATTGCCAAATTCTTCAATAGTCCCAATACGAAGGTAATGTTGTTTATCAACTTCACTGCTGAAGGTGCTGAAACTTTCAAATCAAAATACCGAGAAACTGCCGAGCAATATAGACAACCAGGTGTAAGCTTTCTGGTGGGAGATGTCAGGTCTACTACAGGTTCTTTCCAGTATTTCGGAGTGAGGGAAGACCAAGTACCTCTAATTTTGGTACAACGTAATGATGGGAAGAAATTTCTTAAACCCAATTTGGAACCTGATCAAATTTCAACTTGGTTCAAGGCATACAAGGATGGAAATATTGCACCATATTTTAAGTCCGAACCTATTCCTGAAGCTAACAACGAACCTGTTAAAGTGGTAGTTGGGGACAGTCTCCAGGACATAGTCTTCAACTCTGGGAAGAATGTTCTGCTGGAGTTTTATTCTCCCTGGTGTATTTATTGCACAGAGTTGGCTCCAACATTGGAGGAAGTTGCTGTCTCATATCAAAGTGATGCTGATGTTATTATTGCAAAACTGGATGGAGTTGCCAACGATATCTCAAGTGATTCCTTTGAAGCCAAACGTTATCCAACAGTGTACTTCAGGTCAGCAAGTGGAAAGATATCAAAATACAGTGGCAATAGGTCCAAGGAAGACATCATAGAATTCATCGAAAAGAATCGGGATAAACATGCTCATCAAGAACAAGCAAAGGGTGACAAAGAAAAAGGAAAAGATGAGCTTTGA 1521 0.4135 MAGKIAICSSVLVFLFFLLLAPLSQISAHESETQEFVLTLDHSNFSDTVKKHNLIVVVFYAPRCDRSKKLAPEYEKAASILSSYDPAVVLAKIDADDEKNKDLATEFEVRAYPTIRILRNGGKNVQEYKGPREADGIAEYLKKQSGPASAEIKSVDDATAVIGENKVAIVGVFPKFSGEEFDNFTALSEKLRADYDFGHTLNAKHLPRGESSVAGPIVRLFKPFDELFVDFQDFHVEALEKFVEESSVPVVTVFNSELRNHPFIAKFFNSPNTKVMLFINFTAEGAETFKSKYRETAEQYRQPGVSFLVGDVRSTTGSFQYFGVREDQVPLILVQRNDGKKFLKPNLEPDQISTWFKAYKDGNIAPYFKSEPIPEANNEPVKVVVGDSLQDIVFNSGKNVLLEFYSPWCIYCTELAPTLEEVAVSYQSDADVIIAKLDGVANDISSDSFEAKRYPTVYFRSASGKISKYSGNRSKEDIIEFIEKNRDKHAHQEQAKGDKEKGKDEL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01524 506 FunFam Protein disulfide-isomerase 5-2 25 144 - -
Vian4g01524 506 Pfam Thioredoxin 382 484 IPR013766 -
Vian4g01524 506 Pfam Thioredoxin 37 143 IPR013766 -
Vian4g01524 506 SUPERFAMILY Thioredoxin-like 247 378 IPR036249 -
Vian4g01524 506 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Vian4g01524 506 CDD PDI_a_family 38 141 - -
Vian4g01524 506 Gene3D Glutaredoxin 375 486 - -
Vian4g01524 506 MobiDBLite consensus disorder prediction 484 506 - -
Vian4g01524 506 FunFam Protein disulfide-isomerase 246 375 - -
Vian4g01524 506 SUPERFAMILY Thioredoxin-like 347 489 IPR036249 -
Vian4g01524 506 FunFam Protein disulfide-isomerase 145 245 - -
Vian4g01524 506 SUPERFAMILY Thioredoxin-like 35 147 IPR036249 -
Vian4g01524 506 CDD PDI_b'_family 266 360 - -
Vian4g01524 506 Gene3D Glutaredoxin 23 143 - -
Vian4g01524 506 NCBIfam protein disulfide-isomerase 37 506 IPR005792 GO:0003756
Vian4g01524 506 ProSiteProfiles Thioredoxin domain profile. 359 487 IPR013766 -
Vian4g01524 506 PANTHER PROTEIN DISULFIDE ISOMERASE 12 505 - -
Vian4g01524 506 CDD PDI_a_PDI_a'_C 380 482 - -
Vian4g01524 506 Gene3D Glutaredoxin 250 374 - -
Vian4g01524 506 ProSiteProfiles Thioredoxin domain profile. 17 146 IPR013766 -
Vian4g01524 506 CDD PDI_b_family 149 245 - -
Vian4g01524 506 Gene3D Glutaredoxin 144 249 - -
Vian4g01524 506 Pfam Thioredoxin-like domain 173 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01524 Vian-Chr4 30446591 30452330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01524 K09580 - gmx:100170705 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01524 4 30446591 30452330 Vian4g01524 4 30446591 30452330 ECH