Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01506 ATGTTAGTGCAGCTCAAACACACTCTCATGATGAAGACAACCCCCTCACCTTTTACGTTTGTAGTAGTGCTACTGTTAACGCTGAGCTGTGCGGCGGAGGAGGAAGCTTCCACCACCATCATCTTCACCACCCTCGGCAGATCCTTCTACGCCTTCGACATCTACTCTCTTCCACTTCACCAACAATCTCTAAACCCTAGCCAAGAACTTCAGCTCACCGATGGCCGCTCCGTTAATTTCAACGGCCATTTCATTTCCAATGCTTCCGCTATCCAACTCCCTGCACACTCTTCTCCTCTCCAACTCGTATACATAACGGAGAGAAACGGCTCCCCGTCTATATTCTACGACGCCCTTTATACTTCCACCACCACTACCAGATCCTCTCATGAATCTGTTGCCGCAGAAAGAATTCAAATCCCTCTGTTACCGAACAAGCCCACCGATACATATCCAGTCTCCATCAAAGACAAACCCAGTGTCACCCCCGATGGGGAATTTTTAATATACGTTTCCACACACGAGGACCCTGGTGTACCACGAGCCAGTTGGGCCGCGGTTTACTCCACCCACCTCCAATCGGGCCTCACCAAGAGACTCACACCCTACGCTGTCGCTGATTTCAGCCCATCCCTCTCCCCTTCCGGTCTCTGGACCGCTGTCGCTTCCTACGGCCCAGATGGTTGGGCCGGCGAAGTGGAGGATCTTACCACAGACATCTACATCTTCCTCACTCGCGACGGAACTCACCGAGTCAAAATCGTCGAGCATGGAGGCTGGCCCTCCTGGGTCGACGATCGGACTCTATACTTCCACCGACGAGGTGACGACCAGTGGTGGAGCATTTACAAAGCGATTATCCCCTCCAACGGTCCCGTTTCCGTTGACTCTGTTACCATCGAGCGAGTCACTCCACCAGGTCTCCACGCCTTCACACCCGCCACCTCCCCAGACAACCACAATTTCATCGCCGTCGCAACGAGAAGACCGGGCTCAAGCTTTCGTCACATCGAATTATTCAACCTGGTGAATAACGAATTCACGGAGCTGACTCGGTTGGTCTCACCTCGTTCTCACCACCTCAACCCCTTCATCTCACCCGATGCATCCCGTGTAGGCTACCACAAGTGCAGAGGAGAACCCAACGCTGACAGCAGCCCCCAGTTTTTACTCGAAAACGTTCGGAGCCCCGTCCCCGGTCTATCTCTATTCCGGTTCGTCGGTTCTTTCCCGGTTTTCTCACCCTCCGGAGACCGCATCGCGTATGTTAACCTTCCAGGGATTTACGTGGTGAACCGGGATGGCTCGAACCTGCGTAAGGTTTCCAATGCGTTGGCGTTTTCCACGGCTTGGGACCGGGTTCGACCCGGTGTGATATACACTGCGATTGGGGAAACCTTTGCCTCTGAGAGCTCGCAGGTTGATATCGTGTCCATTGACGTTGATAACGAGAACAGTGTGAAGAGGTTGACCTTGGACGGAAAGAACAACGCGTTTCCGTCACCCTCGCCTGACGGGAAACGGATCGTGTTTCGGTCGGGTAGGTCGGGTCATAAGAATCTTTACATAATGGACGCTGTTGATGGAGAGAGTAAGGGGCTTCAAAGATTGACGGAGGGTCCGTGGACTGACACCATGTGCAGCTGGTCACCGGATGGGAAATGGATCGCTTTCGCGTCGGACCGGCATGCGCCGGGAACCGGGAGTTTCGAGTTGTACCTGATCCACCCGGATGGAAGCGGGCTGCGGAAGGTGATTGAGAGCGGGTCGGGCGGGAGGACGAACCACCCGTATTTTAGCCCCGATGGGAAGAGCATAACGTTTACTTCGGACTATGCGGGTATATCCGCGGAGCCAATCTCGAACCCGCATCACTACCAGCCCTATGGTGAAATATTCAGGGTTAGATTGGATGGGTCGGGTATAGAGAGACTGACCCATAACTCGTACGAGGATGGAACACCTGCTTGGTCACCCAAGTATATACGGCCAATGAATGTTGAGATGGCAAAGGGTGGACCCTACTGCTCCTTCGAAGATTGCCATTGGCTCAACATTATGCCCAATTCCTCCTCAGCTTTCGCTGCTGCTCTCTAG 2097 0.537 MLVQLKHTLMMKTTPSPFTFVVVLLLTLSCAAEEEASTTIIFTTLGRSFYAFDIYSLPLHQQSLNPSQELQLTDGRSVNFNGHFISNASAIQLPAHSSPLQLVYITERNGSPSIFYDALYTSTTTTRSSHESVAAERIQIPLLPNKPTDTYPVSIKDKPSVTPDGEFLIYVSTHEDPGVPRASWAAVYSTHLQSGLTKRLTPYAVADFSPSLSPSGLWTAVASYGPDGWAGEVEDLTTDIYIFLTRDGTHRVKIVEHGGWPSWVDDRTLYFHRRGDDQWWSIYKAIIPSNGPVSVDSVTIERVTPPGLHAFTPATSPDNHNFIAVATRRPGSSFRHIELFNLVNNEFTELTRLVSPRSHHLNPFISPDASRVGYHKCRGEPNADSSPQFLLENVRSPVPGLSLFRFVGSFPVFSPSGDRIAYVNLPGIYVVNRDGSNLRKVSNALAFSTAWDRVRPGVIYTAIGETFASESSQVDIVSIDVDNENSVKRLTLDGKNNAFPSPSPDGKRIVFRSGRSGHKNLYIMDAVDGESKGLQRLTEGPWTDTMCSWSPDGKWIAFASDRHAPGTGSFELYLIHPDGSGLRKVIESGSGGRTNHPYFSPDGKSITFTSDYAGISAEPISNPHHYQPYGEIFRVRLDGSGIERLTHNSYEDGTPAWSPKYIRPMNVEMAKGGPYCSFEDCHWLNIMPNSSSAFAAAL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01506 698 SUPERFAMILY Tricorn protease N-terminal domain 409 659 - -
Vian4g01506 698 Gene3D - 458 660 IPR011042 -
Vian4g01506 698 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Vian4g01506 698 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 23 684 - -
Vian4g01506 698 Pfam WD40-like Beta Propeller Repeat 159 180 IPR011659 -
Vian4g01506 698 Pfam WD40-like Beta Propeller Repeat 488 523 IPR011659 -
Vian4g01506 698 Pfam WD40-like Beta Propeller Repeat 535 573 IPR011659 -
Vian4g01506 698 Pfam WD40-like Beta Propeller Repeat 594 611 IPR011659 -
Vian4g01506 698 SUPERFAMILY DPP6 N-terminal domain-like 159 448 - -
Vian4g01506 698 Gene3D - 145 266 IPR011042 -
Vian4g01506 698 Gene3D - 267 456 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01506 Vian-Chr4 30162127 30164223 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01506 - - gmx:100791865 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01506 4 30162127 30164223 Vian4g01506 4 30162127 30164223 ECH