Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01490 ATGGCGGAGGAGAAGAGGGCGTCGTCGTCGTTCGTGAAGAAAGGCGACCGGCAAATGTTCACGGTGGAGCTTCGACCTGGTGAGACCACCATAGTTTCGTGGAAGAAGCTGATGAAGGACTCTAGCAAGCCTAACGGATCCAATTCGGCACCGCAACAAGTCGCAATCGCTCCGGGTGAACCTGTTGATGTTGAAGAAAATGATCCCTCTCAGCCAAACCGTTTCAGTGCTGTAATAGAGAAGATTGAACGCCTTTACATGGGCAAGGATAGTAGTGATGATGAGGATCTGCTCGATGTTCCTGATGATGATCAATATGATACCGAAGACTCTTTTATAGATGATGCTGAACTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGGTTCTTTGTAAATAGGGGGAAACTGGAACGCATAAATGAACCTGCTGCACTACCTAACCAGCAACCAAAGAAAAGGCGCAGAAAAGATATAATGAAGAATGGTGAAAACAATGATGGTCATGGATCAAATAAAAATGCAAAAGTTGGCAGGCCAGCATCTGGCAAAACAGCTTCACTGCACGCAAGAAATATGTTAAATTTATCTGAGAATTTGGTTGCACCTGATGAACATTATGAAGACTTGAAACTTTCAAATCAGTCAGATGTCTCTGGAATTATTTCAAAAAAGAAAGCTGTTGATACTAAACCGACATTGGACCCTTCCATCTCTTTGAAAACATCAAATGATGATGTTCCTGGTGTAACAGATGCAAAAGATTCTGACAAGCAAAGGATAGGAGTTTTTCAATCTAAGAACATTAGTGATAAATGTAAAGATGGAAGTGGATCATTTGATGCATCTCATCAGAAGTACAATGAGAAAAGTGCTTATGCACATTCCAAATCCCAACCTGGAAGACCCCCAAATAGTATTGATGATTGTGAAAATATTATACGGACAAAAGAAAAAAGTGGTATGTGTGAACTGCCAGATCTTAACCTGTCTGAGGGGAAGTCTGCTACCCAAGCAACGAAATCTGAAAACATGCAGAAGAAAGAGGGTTCTAGTGTTAGGCCAAAAACTTCAATGCTTGAAAAGGCTCTTCGTGAGTTGGAAAAAATGGTTGCAGAATCCAGACCACCAGCAGTGGATAACCAGGATGCTGTCAAAAGGAGGTTACCTAGAGACATAAAGCTAAAGCTTGCTAAAGTTGCTAGACTGGCGGCAACCCATGGGAAAGTATCAAAAGAGTTAATTAACCGTCTTATGAGTATTCTAGGCCATCTGATTCAGCTAAGAACATTAAAGAGAAACTTAAAAATAATGATCAGTATGGGCCTGTCAGCAAAGCAGGAGGAGGATAATAGGTTTCAACAAATAAAGAAAGAAGTTATTGACATGATTAAGATGCTGCCCCCAACTTTTGAATCCAAGCAGCAGCAGAAAGGTGAAGCATCTGGTGATTTTCAAGAATTTGGTCCTGATGGAAAAACAAATACAAAAAGAAAGTTTGCCATGGATGCTGCATTGGAGGACAAGATCTGTGATCTCTACGATATTTTTGTCGATGGGTTGGATGAAAACGCAGGTCCACAGATCAGAAAGTTGTATGCTGAGCTTGCAGAACTATGGCCCAGTGGTCACATGGACAACCATGGGATCAAACGTGGAATTTGCAGGGCAAAAGAGAGGCGCAGAGCACTGTACAACAAGCATAAGGACCAGGAAAAAATTAAGAGGAAAAAATTGCTGGCACCTAAGCAAGAGGAGAACGTTCGATTTGATGCCAATTCAATTACTTCACAACAGAACCTGCGAGAGAGATCAGCTCCTGAGTCCAGCAGTCATGGTTTTACTTCAGGGAGCAAGCAAGTTTCTAATGCAAGTCCAACTGGCCGGGTACCCAGTCCAATAAATGGTCTAAAACAAGAAAAAGCAAAGGGAAGTTCAAGCAGTTCCCTGGATGATGTCAGGGCTGCAGAAGGTGTGCTAACAAAGAAGGTAAAGAGAAAACCAGAACTCGAGTTAGAAGCACATTTAGTTGCTGAGAAGGTGGCTTCCTTGCAGGGAGAAGAAAGGCCCAGGTCCCTAAAGCAGCAGTCCTCAGGGCCACTTGCCAACAAATCAAATCTTCAGCCAACATCTGTTCCTGATCTTCAACATTCAAGCTAA 2172 0.4222 MAEEKRASSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDSSKPNGSNSAPQQVAIAPGEPVDVEENDPSQPNRFSAVIEKIERLYMGKDSSDDEDLLDVPDDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPAALPNQQPKKRRRKDIMKNGENNDGHGSNKNAKVGRPASGKTASLHARNMLNLSENLVAPDEHYEDLKLSNQSDVSGIISKKKAVDTKPTLDPSISLKTSNDDVPGVTDAKDSDKQRIGVFQSKNISDKCKDGSGSFDASHQKYNEKSAYAHSKSQPGRPPNSIDDCENIIRTKEKSGMCELPDLNLSEGKSATQATKSENMQKKEGSSVRPKTSMLEKALRELEKMVAESRPPAVDNQDAVKRRLPRDIKLKLAKVARLAATHGKVSKELINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEEDNRFQQIKKEVIDMIKMLPPTFESKQQQKGEASGDFQEFGPDGKTNTKRKFAMDAALEDKICDLYDIFVDGLDENAGPQIRKLYAELAELWPSGHMDNHGIKRGICRAKERRRALYNKHKDQEKIKRKKLLAPKQEENVRFDANSITSQQNLRERSAPESSSHGFTSGSKQVSNASPTGRVPSPINGLKQEKAKGSSSSSLDDVRAAEGVLTKKVKRKPELELEAHLVAEKVASLQGEERPRSLKQQSSGPLANKSNLQPTSVPDLQHSS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01490 723 MobiDBLite consensus disorder prediction 660 691 - -
Vian4g01490 723 Pfam HPC2 and ubinuclein domain 100 142 IPR014840 -
Vian4g01490 723 MobiDBLite consensus disorder prediction 329 361 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 569 589 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 216 313 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 90 109 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 693 723 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 37 74 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 593 636 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 335 350 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 95 109 - -
Vian4g01490 723 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 10 717 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 140 194 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 153 168 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 40 54 - -
Vian4g01490 723 MobiDBLite consensus disorder prediction 569 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01490 Vian-Chr4 29894627 29905322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01490 - - gmx:100793966 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01490 4 29894627 29905322 Vian4g01490 4 29894627 29905322 ECH
Vian7g00258 7 7666633 7685752 Vian4g01490 4 29894627 29905322 PCT