Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01448 ATGGATGTTGCACATTTATTGTTTGGCATATTTGGGAATGCTTCCGCTCTGTTCCTCTTCTTGGCTCCAGTGATCACATTCAAGAGGATTATACAGAACAGATCAACAGAGAAATTCTCGGGCATTCCATATGTCATGACACTGCTCAATTGTCTCCTTTCAGCATGGTATGGTCTACCTTTTGTGTCTCCCCACAATATATTAGTGTCAACAGTGAATGGCACTGGATCTTTGATTGAGATCGTATACGTGTTGATCTTCATCGTATTGGCCCCCAAAAAGCAGAAGGCTAAAATTCTTGGTCTCTTCACCTTCGTGCTCTCTGTGTTCTCTGCTGTTGTTTTTGTGTCCCTTTTTGCCCTTCACGGCAATTCAAGAAAGCTCTTCTGCGGCTTTGCTGCTGCAATATTTTCCATAATCATGTATGGCTCTCCACTCTCTATTATGAGACTAGTGATCAAAACCAAGAGCGTGGAGTTCATGCCCTTCTTCTTGTCGCTGTTTGTGTTTCTCTGCGGCACTTCCTGGTTTATCTTCGGTCTGCTAGGCCGTGACCCATTTGTTGCAGTACCTAATGGTGTTGGTTCTGCTTTGGGGGCAATGCAACTGATATTGTATGTCGTATACCGAGATAATAAAGGTGATACGGGGAAAAAAGCCCCAACAGTGGAGGAATTCATGGAGATGGGGGATGCAAAACCCCAACAAGGGAAGCAATCCAATGCAAATGGAACTCAAGGATGA 744 0.4422 MDVAHLLFGIFGNASALFLFLAPVITFKRIIQNRSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTVNGTGSLIEIVYVLIFIVLAPKKQKAKILGLFTFVLSVFSAVVFVSLFALHGNSRKLFCGFAAAIFSIIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFVAVPNGVGSALGAMQLILYVVYRDNKGDTGKKAPTVEEFMEMGDAKPQQGKQSNANGTQG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01448 247 Gene3D - 9 104 - -
Vian4g01448 247 MobiDBLite consensus disorder prediction 228 247 - -
Vian4g01448 247 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Vian4g01448 247 FunFam Bidirectional sugar transporter SWEET 7 97 - -
Vian4g01448 247 Gene3D - 125 220 - -
Vian4g01448 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Vian4g01448 247 Pfam Sugar efflux transporter for intercellular exchange 131 213 IPR004316 GO:0016020
Vian4g01448 247 PANTHER RAG1-ACTIVATING PROTEIN 1 16 221 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01448 Vian-Chr4 29031227 29033444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01448 1 190 Miscellaneous Gene Families AT1G21460 77.895 1.78e-107 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01448 K15382 - gmx:100785977 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01448 4 29031227 29033444 Vian4g01448 4 29031227 29033444 ECH