Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01443 ATGGATATATGGAATAGTTGGTGGGTTATGCAAATTATGCAGTTGCTAGGCTTTGTTAGTTTTTGGGTTTCATTTGCAAAGTTTAGGACTTTACTCTCAAGAGCTTTTGGTTATGGTCACAAAGTTGTGAAAGGTGATTGCAGTGCCTGGATCTTTGTTTCGTCCAATGGGTTGGTCACAGTTGGTTCTTTCTTATTCTTCCTCTTGGTCATTTCCTGGGTTTATTTATTTGCATTTCCCACTCCTCCCACAGTGATTAAGAGTTATGAGACTTCCAACGGTTCTGTCTCACCTGTTCAGAGTCATGATATTCCCAACAGTTCTCACTCATCTTTCCAGAGTCATGATATTCCCAACAGTTCTCACTCATCTTTCCAGAGTCATTATATTCCCAACAGCTCTCACCCTTTTGCTCAGAGTTATGATGAGATTTTAAAATCCAATGTTTCAATGGACGCATGCAATGTGTTTGAAGGAAGTTGGGTAAGGGATGATAGCTACCCTTTGTATGATGCTTCTCAATGCCCCTTTGCAGAAAGGGGTTTTAATTGCCTTGCCAATGGGAGAAAAGATAGAGGTTACACAAAATGGAGGTGGAAGCCTAAGAACTGTGAGATTCCAAAGTTTGACGCCCGTGGAATACTAGAACAACTTCGTGGGAAAAGGGTGGTTTTTGTTGGTGATTCGTTGAGTAGGACGCAATGGGAGTCCATGATATGTTTGCTAATGACAGGAGTTGAGAATAAGAAGAGCGTATACGAAATCAAAGGCAACAAGATCACAAAACAGATAAGGTTTTTAGGTGTAAGGTTTAGTACTTTTGATGTTAGAGTTGATTTTTATCGCTCGGTATTCCTGGTGAAGCCTGGTTCTGTGCCTAGACATGCTCCTCAGAGGGTGAAGACTACGCTCAGATTGGATAAGATTGATGATATTAGCAACGAGTGGATTGATTCTGACTTTCTTATATTCAATTCAGGTCACTGGTGGACGCGGACTAAACTTTTTGACATGGGGTGGTATTTTCAGGTTGATAACTCGCTGAAGCTTGGAATGTCAATTAATTCTGCTTTCAAAACAGCTTTGCTCTCCTGGGCATCTTGGGTGGAGAATGCAATTAATACAAACAGGACAAGGGTTTTCTTCCGCACCTTTGAATCATCTCATTGGAGTGGACAGAACCATAATTCTTGCAAAGTGACTCAAAAGCCTTGGAAGAGAACTAATGGCAAGGAGAGAAGTCCAATTTCAGATATGATCAGCGAAGTTGTGAAAAATATGAGTACTCCCGTGACAGTTTTGCATGTTACACCAATGACTGCATATAGAAGTGATGGACACGTGGGGACTTGGAGTGACAAGCCAGCTGTGCCCGATTGTAGCCATTGGTGCTTACCTGGTGTTCCTGATATGTGGAACGAAATTCTCCTCTCATATTTGCTACCAAAAGAAGAAGCAAATTAA 1464 0.4139 MDIWNSWWVMQIMQLLGFVSFWVSFAKFRTLLSRAFGYGHKVVKGDCSAWIFVSSNGLVTVGSFLFFLLVISWVYLFAFPTPPTVIKSYETSNGSVSPVQSHDIPNSSHSSFQSHDIPNSSHSSFQSHYIPNSSHPFAQSYDEILKSNVSMDACNVFEGSWVRDDSYPLYDASQCPFAERGFNCLANGRKDRGYTKWRWKPKNCEIPKFDARGILEQLRGKRVVFVGDSLSRTQWESMICLLMTGVENKKSVYEIKGNKITKQIRFLGVRFSTFDVRVDFYRSVFLVKPGSVPRHAPQRVKTTLRLDKIDDISNEWIDSDFLIFNSGHWWTRTKLFDMGWYFQVDNSLKLGMSINSAFKTALLSWASWVENAINTNRTRVFFRTFESSHWSGQNHNSCKVTQKPWKRTNGKERSPISDMISEVVKNMSTPVTVLHVTPMTAYRSDGHVGTWSDKPAVPDCSHWCLPGVPDMWNEILLSYLLPKEEAN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01443 487 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 206 478 IPR026057 GO:0016740
Vian4g01443 487 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 78 477 IPR029962 GO:0016413
Vian4g01443 487 Pfam PMR5 N terminal Domain 153 205 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01443 Vian-Chr4 28968097 28970953 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01443 - - var:108329943 1025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01443 4 28968097 28970953 Vian4g01443 4 28968097 28970953 ECH