Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01424 ATGCAGAGCAGGGGATCGAGTCACAGACTCTCAAGTATGGGTAACAATCGATCCCGCATTCCAGCACTCCTCATCTCCATGTTCGCCACTTTCGCTTCTATCTACGTCGCTGGAAGGCTTTGGCAGGATGCAGAGAATCGCGTTTACCTCATCAAAGAGCTCGACAGGATCACTGGTCAGGGACAATCTGCTATATCTGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAAAAGCTTGATGCCCTTGAGACGGAACTTTCTGCGGCTAGACAAGAGGGTTTTGTTTCGAAACCCTTGATAGAGACTAATGGAACTTACTCTAGGAGAAGGCCGTTGGTTGTGATAGGTATACTGACAAAGTTTGGCCGCCAAAAGAATAGAGATGCAATCCGCAAGGCGTGGATGGGAAGTGGTTCATCTTTGAAGAAAATTGAAGATGGAAAGGGCATCATTGTGCGATTTGTTATTGGTAGAAGTGAAAATCGTGGAGACAATCTTGATATAGACATTGATCGTGAGAATAGGCTGACTAATGACTTCATAATTCTTGATAATCACGTGGAAACAAATGATGCATTGCCAAAGAAGGCTAAATTGTTCTTTGCTTATGCTGCAGACAAATGGGATGCTGAGTTTTATGCTAAAGTCAATGATGATGTTTATGTAAATATTGATGCCTTGGGAGCTACACTGGCTGCTCACTTGGACAAACCACGTGTTTACTTGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAGCTGAACCATAAATGGTATGAACCAGAATGGTGGAAATTTGGTGACAAAAAATCATACTTTCGCCATGCATCAGGAGAGATGTATGTTATATCACGAGCTTTGGCCAAATTTATATCAATAAACAGATCTATTCTTCGTACATATGCCCACGATGATGTGAGCGCTGGATCCTGGTTTATTGGACTTGACGTGAAGCATGTTGATGAGGCAAAGTTTTGTTGTTCATCTTGGTCGACAGGAGCAATCTGTGCTGGTGTTTGA 1032 0.4283 MQSRGSSHRLSSMGNNRSRIPALLISMFATFASIYVAGRLWQDAENRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALETELSAARQEGFVSKPLIETNGTYSRRRPLVVIGILTKFGRQKNRDAIRKAWMGSGSSLKKIEDGKGIIVRFVIGRSENRGDNLDIDIDRENRLTNDFIILDNHVETNDALPKKAKLFFAYAADKWDAEFYAKVNDDVYVNIDALGATLAAHLDKPRVYLGCMKSGEVFSELNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHVDEAKFCCSSWSTGAICAGV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01424 343 Coils Coil 76 96 - -
Vian4g01424 343 Gene3D - 110 335 - -
Vian4g01424 343 Pfam Galactosyltransferase 130 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vian4g01424 343 Pfam Domain of unknown function (DUF4094) 19 95 IPR025298 -
Vian4g01424 343 FunFam Hexosyltransferase 106 335 - -
Vian4g01424 343 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 325 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01424 Vian-Chr4 28717287 28723799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01424 23 343 Glycosyltransferase AT5G53340 72.897 1.22e-180 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01424 K20854 - gmx:100779561 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01424 4 28717287 28723799 Vian4g01424 4 28717287 28723799 ECH