Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01423 ATGAGAGCTTCTTCTTCGTTCATCGTTGATCAAATGCATTGTGTCACCATGGGCTGCCGCGAGTCAAGGTGCAGAATCATGAAGGCTTTCTTGGCACAAGTCACGGTTTCTCTGCTTCGAATTGTAGTCAAAGAAAACAAAACTTACAAGGTGAAGTTAGAATCCGGTTCCGAAGTGGGACGGCACACGTTTGTTCGATGGACTACGATTTCAGAAGCAGGTCGGGCCTACAAGCTCCGATGTACCGTCCGCAGCCGCCACCGCCACCGATGTACCGTCCGACACCCAGGATTAGGATTTGGCGTTAGGGTTGCTATAAGGCCAGAATATAGGATCACACCGCCGCCTCATTTATCGCCTCATGCGGGAGATAATCCAAGGAGCAACTTCCAATTTGAATTTGAATTAGAGAGAAAAATTTTAGCTGAAGCGGATAAGGATAACCCAAATTGGAGCAAATTTGGATCAGAAAATATCCCGACCAAAGTTTCTGATTCTTCAACAGCAAAGGTTCCTGCTGTGGATTCCATTATGAGCAAATTTATAGCTATGGGGCTCAGCCAAGAAGCTGTTCCAATTGCTGTTGAAAACTATGGTGATGATCCAACCAAAGTTCAAGAATTTGTGAAAGGCTACACACTTCTACGTGAAATGGGATTTTCATCAAATAGTGTTGCGGAAGCTCTGGTTATGAATGACAACCGTACCGACAGGGCACTAGCGCATTTCCTTAACGGTTCATCGTAG 747 0.4552 MRASSSFIVDQMHCVTMGCRESRCRIMKAFLAQVTVSLLRIVVKENKTYKVKLESGSEVGRHTFVRWTTISEAGRAYKLRCTVRSRHRHRCTVRHPGLGFGVRVAIRPEYRITPPPHLSPHAGDNPRSNFQFEFELERKILAEADKDNPNWSKFGSENIPTKVSDSSTAKVPAVDSIMSKFIAMGLSQEAVPIAVENYGDDPTKVQEFVKGYTLLREMGFSSNSVAEALVMNDNRTDRALAHFLNGSS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01423 248 PANTHER LD44032P 95 246 IPR038870 GO:0000813|GO:0043130|GO:0043162
Vian4g01423 248 FunFam Ubiquitin-associated/translation elongation factor EF1B protein 170 247 - -
Vian4g01423 248 SUPERFAMILY UBA-like 208 246 IPR009060 GO:0005515
Vian4g01423 248 Gene3D UBAP1 SOUBA domain 162 247 IPR042575 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01423 Vian-Chr4 28713131 28716494 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01423 - - gmx:100500107 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01423 4 28713131 28716494 Vian4g01423 4 28713131 28716494 ECH