Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01403 ATGAATAGAGGGAGTAACTTTATTCCAAATGGTATGGTGTCTAGTGAGACACCATTTGTTGCAAAAGTGCTTGACCCGAAGAGATGGTCAAAAGCCGAAGGAAGAACTAGAGACCTGCTTACACATATTCAGCCCAACCATACATCAGAAACATGTCGAAATGCTGTAGTATCTTACCTACGATCCCTCATCATGAACTCTGTCCCTTGCCAGGTATTTCCATTTGGTTCCGTACCCTTGAAGACCTATATACCTGATGGGGACATTGATCTAACAGCGTTCTGTGATAATCATCATTCAGAAGACCGTCTGATCCAAGATATACAGCGTATTTTAGAGAGAGAAGAGAAGAATCAGGACGCGCAATTTCAAGTCAAAGAGGTTAAGTATATCGGGGCCAAGGTGAAGATTATCAAGTGTTTAGTCGAAAACTTTGTAGTTGACATATCTTTCAACCAGATTGGTGGTTTGGGAACACTTTGTTTTATTGAGGAGAGCCGCATCCTGGGATCTTACCATGGACTTCTTTCAACCTATGCATTGGAAACTTTAGTCATATATGTATTTCATGTTTACAATAGTACATTTGCTGGACCACTTGAGGTACTCTATCGATTTTTGGATTTCTTCAGCAAATTTGACTGGAGTAAGTATTGTCTCAGCTTGCGAGGTCCAGTGCCTATAAGTTCACTCCCTAATATGAAAGCTGAACCACCACGTAAGGATTGCCAAAGGTTGTTGCTGAACCACCAATTTCTTAATGCTTGTGAATCCATGTACGGCATTCTGTGTAGCAGCAAAGAATTAAAAGAGAAACCATTTGTTTCTAAATACATTAGTATTGTAGATCCTTTGCTTCCTAACAACAACATAGGAGGAAGCATTAGAAAAGGAAACTTCTCTAGGATAAAAAGTGCAATTGCTTTAGGTGCAAAGCGAATCCAGAGGTTACTGGCTTGCCCAGAAGACAATGTAATAGCAGAATTTGATTTGTTTTTTAAGAATACATGGGAGAGAAACGGTAAAGGTTACTGGATCGATGCACTCACTTATAACCGTTACATAAGATACGGACATGTTACAACTACTGGTGAACATTATGGTATTTACAAAAATCTTTCTAATCTTTCAGAAGAATCGAAGCAAATGCTAGGACCCTCTGATGAACTTGCTGCTTCTCAAACTTTGAGATCAAAGCATGGCGGCGTTTTGACTGGTACAATGGCCTTTGATATGAAGCATACAAATACCATCAAGAATGCACTTGCTAATAGAGACAAAAGTGCTATATGTTCATCATATGAAGTTCGTGACACGCCTTACTTTCCCGGGTTTTATTCTAGTTCAGAATTTGGTCCTTTGTATAGTGAAGCTTCAACTAATCATTGCTACAGGGCCAGAGTTTCATCTGAAAATTATCAACCTTTTGGGCAGATTTCGTACGATTGGAGAAATGAATATGAAGATGACCCAGAATATTCTTCAAGTGGTTATTATTGCAAATTTGGGTTGGACGTCAATGATGAAACTGTCTGTCCGGTTGATGGGGCAATGCTGATGCAACAGGAAAAGTTTGGTTTTCCTTATTTCAATGAATACCTGCAAGCACCAGTGAATGTGAATCCGTGTGTACCTTTCCCACTACCCCACGTTTTAGCTTCTGGATACATGCATGAAAACTCATTTGGGATGTTTCGAGAAGATGCCTCTTCTTCAGAGTACTTTCCAGGCTACAATACGCCTCATTATCACAACACAGCTCCGTTTCCATTTGCAAGACCATTCTATGAGGGAGAGTTTACTGAACCATTTGATTATAGCCCACCAGTACCTCATCCAGATCATCAAAGACAAATGGATATTAACAAAGGTTCCAGCTCTGGTAATTCATCTTGGCAGACATGCGCTTCAAGCTACACGCCAAAAGTTTATGAGAACACTAGTACTGAAGCTATCAATTCAGATTTTAAAGCTCTTCAATTAGGTAAGAAACTGCTAAAGACTGCGCCTAACTCATCAATTCCTAATCTTGTTGGCCCTTCTAGTCCGAGTCAGAGAACCGTTGATGACCAACGTTTTCAACCGGTTGCAGATGGTTCCTCTGGACCATCATTTGAAGTTCCTACCATGTTCCCATTCTACAATCTTCCTACCGGGACTGAAACTACTTTTGCAGCCAGAAACAATGTGGGGATGATGCATGCTGGTTTAAGCAATCTTTATCCGCCAGAGTCGAATGCCAGTCATGATACAGCAGCTACTTCAGGGTACTTTGTGAATGAAGGTTATGATATACTGGATAGTGATTTTTTAAGCTATTGGTGGAATCTGCAATATGGAAGGTTTTGCAAGAATCAAATATCAAAGATACCTTTTCCTCCCTTTGCTACAGTGCCAATGCATTTAAGGGCACAATTTGCGGGGCACATGAAACCTCAGCGAGGTATCATGAACATGGAGCATCTTCAAACCCCGGTTCCTGTGATTCCATATGGAGATGTTTCTCCCTTATATGGGAATATTAATGAACGTGTTGGTTTTTGGCTTCCAAGAACTAGTGATGGGACTGGGACTTACTTTCCAAAGACAAATTTTTCAAGTTATTACGAGTCTCAGCCAAGGTTTTGCAAGAAAAATCGTCTTCCGCTAAGTCCATACATCCAAAATCCCAAATATGAAAAGAAGAATAACCATAGTGAAAGGGATAAGAATTTGCATTTGAGTTCAAAGGAAAGGTTTCCCAGCTATGGTCAGTTGCATGGAAAATTTGAGAAGCCAGGTTCAAGTGAATCATCCCATCGAGGTGAAAGCTCAGAAAGAGGTACTAGTGAGGCAGAAAAACCAGGAACAGATTCTAAAAGCACTTCTAGACATGAGCCCTCATCATCAAATCACCTCTGGTAA 2904 0.4036 MNRGSNFIPNGMVSSETPFVAKVLDPKRWSKAEGRTRDLLTHIQPNHTSETCRNAVVSYLRSLIMNSVPCQVFPFGSVPLKTYIPDGDIDLTAFCDNHHSEDRLIQDIQRILEREEKNQDAQFQVKEVKYIGAKVKIIKCLVENFVVDISFNQIGGLGTLCFIEESRILGSYHGLLSTYALETLVIYVFHVYNSTFAGPLEVLYRFLDFFSKFDWSKYCLSLRGPVPISSLPNMKAEPPRKDCQRLLLNHQFLNACESMYGILCSSKELKEKPFVSKYISIVDPLLPNNNIGGSIRKGNFSRIKSAIALGAKRIQRLLACPEDNVIAEFDLFFKNTWERNGKGYWIDALTYNRYIRYGHVTTTGEHYGIYKNLSNLSEESKQMLGPSDELAASQTLRSKHGGVLTGTMAFDMKHTNTIKNALANRDKSAICSSYEVRDTPYFPGFYSSSEFGPLYSEASTNHCYRARVSSENYQPFGQISYDWRNEYEDDPEYSSSGYYCKFGLDVNDETVCPVDGAMLMQQEKFGFPYFNEYLQAPVNVNPCVPFPLPHVLASGYMHENSFGMFREDASSSEYFPGYNTPHYHNTAPFPFARPFYEGEFTEPFDYSPPVPHPDHQRQMDINKGSSSGNSSWQTCASSYTPKVYENTSTEAINSDFKALQLGKKLLKTAPNSSIPNLVGPSSPSQRTVDDQRFQPVADGSSGPSFEVPTMFPFYNLPTGTETTFAARNNVGMMHAGLSNLYPPESNASHDTAATSGYFVNEGYDILDSDFLSYWWNLQYGRFCKNQISKIPFPPFATVPMHLRAQFAGHMKPQRGIMNMEHLQTPVPVIPYGDVSPLYGNINERVGFWLPRTSDGTGTYFPKTNFSSYYESQPRFCKKNRLPLSPYIQNPKYEKKNNHSERDKNLHLSSKERFPSYGQLHGKFEKPGSSESSHRGESSERGTSEAEKPGTDSKSTSRHEPSSSNHLW 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01403 967 CDD NT_PAP_TUTase 53 157 - -
Vian4g01403 967 SUPERFAMILY PAP/OAS1 substrate-binding domain 163 318 - -
Vian4g01403 967 SUPERFAMILY Nucleotidyltransferase 38 164 IPR043519 -
Vian4g01403 967 Gene3D Beta Polymerase, domain 2 37 160 IPR043519 -
Vian4g01403 967 Gene3D - 161 328 - -
Vian4g01403 967 MobiDBLite consensus disorder prediction 926 954 - -
Vian4g01403 967 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 165 963 - -
Vian4g01403 967 MobiDBLite consensus disorder prediction 880 967 - -
Vian4g01403 967 MobiDBLite consensus disorder prediction 893 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01403 Vian-Chr4 28420449 28425863 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01403 - - vum:124822671 1957.57