Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01302 ATGGCTCAAACACTGTCAACTTCATCACTTCTACTATCACCAAAAACAGGGTACTCTGCTAAACCCAAGAACAATGTTGTTACACCTTGCATGGCCTCTTTTCCGACGAGGAAAGAGTTTCCTAGGCTAGAAAGGATGAGGCTTCAGGCTTCTGCTGATAACAAAGACCACTCTTTGGAAGTACAACATCTTAACAAGGGCGACCAAACTACTGCGGTTGAGAGAAACCCACGTAGAACTGCCCTCGACATTTCACCTTTTGGTCTCTTGGACCCGTGGTCACCCATGAGGAGTATGCGCCAGATTTTGGATACAATGGACCGAATTTTCGAAGATACCATGACATTCCCCGGAAGAAACGTGGGAGGAGGGGAGATTCGTGCCCCTTGGGACATCAAAGATGAAGAACATGAGATCAGAATGAGGTTTGACATGCCAGGTCTTTCTAAGGAAAATGTTAAGGTATCGGTGGAGGACGATGTGCTTGTCATAAATGGTGGTCACAAGAGTGAACAAGAACAAGGTGGTGATGACTCTTGGTCCAGCAGGAGCTATAGTTCCTATAACACCCGTTTGAAGCTTCCAGATAACTGCGAGAAGGACAAGGTTAAGGCAGAGTTGAAAAATGGCGTGCTCTATATCACCATTCCTAAGACCAAGGTTGAACGCAAGGTTATTGATGTCGAAGTTCATTGA 696 0.4569 MAQTLSTSSLLLSPKTGYSAKPKNNVVTPCMASFPTRKEFPRLERMRLQASADNKDHSLEVQHLNKGDQTTAVERNPRRTALDISPFGLLDPWSPMRSMRQILDTMDRIFEDTMTFPGRNVGGGEIRAPWDIKDEEHEIRMRFDMPGLSKENVKVSVEDDVLVINGGHKSEQEQGGDDSWSSRSYSSYNTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVEVH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01302 231 Gene3D - 89 230 IPR008978 -
Vian4g01302 231 Pfam Hsp20/alpha crystallin family 131 231 IPR002068 -
Vian4g01302 231 CDD ACD_sHsps-like 131 218 - -
Vian4g01302 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 121 231 IPR002068 -
Vian4g01302 231 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 230 IPR044587 GO:0009408
Vian4g01302 231 FunFam 26.5 kDa heat shock protein, mitochondrial 88 230 - -
Vian4g01302 231 SUPERFAMILY HSP20-like chaperones 107 228 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01302 Vian-Chr4 26369357 26370951 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01302 K13993 - gmx:548078 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01302 4 26369357 26370951 Vian4g01302 4 26369357 26370951 ECH