Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01260 ATGGGGGATTCAAACACCCAGATTCCTGAATACGGAAAAAGTTTTAACCTTTTCAGATACAATTCACCGACCATTCAGATCGTTCTTATTGGGTTGGTATGCTTTTGCTGTCCCGGCATGTTCAATGCCCTCTCCGGCATGGGTGGCGGTGGCCAAGTCAACTCCACCGCTTCCAATAACGCCCTCACCGCCCTCTACACCACCTTCGCAGTCTTCGGTATTCTCGGTGGCGGCATCTACAACATCCTCGGACCCCACCTCACCCTCTTCGCAGGTTGCTCCACCTACGTTCTCTACGCCGGCTCCTTCCTTTACTACAACCACTACCAGCACCAGTTCTTCGCCATCACCGCCGGCGCCATTCTGGGAATCGGTGCCGGTCTCCTCTGGGCGGCGCAGGGCGCCATCATGACCTCCTACCCGCCAGAGAATCGCAAAGGCACTTACATTTCCCTCTTCTGGAGCATTTTCAACATGGGGGGTGTCATCGGTGGTTTAATTCCATTCATTTTGAATTACAACCGTGGCGACGCTCCTGCCACCGTCAACGACGGAACCTACATAGGGTTCATGGCTTTTATGTCCGCTGGGGCTGTTTTATCGTTGACCATTTTGCCAGCGAGCAAGGTTGTTCGAGACGATGGCACCAGGTGCACTCACATGGTGTACTCCAATGTGACAACTGAATCCTACGAAATTCTCAAGCTTTTCTACAATTGGAAGATGCTTCTCATCGTTCCCGCTGCTTGGTCGAGCAACTTCTTCTACACCTACCAGTTCAACCATGTTAATAAGCCACAGTTCAATCTGAGGACCAGAGGGTTCAACAATGTGTTCTATTGGGGGGCGCAGATGCTGGGTTCGGTTGCCATTGGTTATGTGATGGATTTCAGTTTCAAGAGTCGCAGGAAAAGAGGGGTTGTGGGAATTTGTGTGGTTGCTCTTCTTGCGTCTGGTATATGGGGTGGTGCCCTTGCGAATCAGATCAAGCGTGACCTCGGTGTGATCATGGATTTTAAGGACTCTGGTTCTCGCTATGCTGGACCCTTTGTCTTGTATTTCAGTTTTGGCTTGCTTGATTCCATGTTCCAAAGCATGGTCTATTGGGTTATTGGGGCCCTCGCCAATGATTCTGAGATTCTTAGCAGGTATGCTGGGTTCTATAAAGGCGTACAAAGTGCAGGAGCTGCAGTGGCATGGCAAATTGATAACCATAAGGTGTCAGGTATGGCTCAGTTGATTGTGAATTGGGTGTTGACTAGTGTTAGCTATCCCTTGTTGTTGGTTCTGGTTGTGTTGGCTGTGAAAGAGGACAACAAGGGAGAAGAGGAACAAGCAAAACAAGTTGCGCCTTCATCGGTTGAAAATGGCTCTGTCCGTTGA 1383 0.4996 MGDSNTQIPEYGKSFNLFRYNSPTIQIVLIGLVCFCCPGMFNALSGMGGGGQVNSTASNNALTALYTTFAVFGILGGGIYNILGPHLTLFAGCSTYVLYAGSFLYYNHYQHQFFAITAGAILGIGAGLLWAAQGAIMTSYPPENRKGTYISLFWSIFNMGGVIGGLIPFILNYNRGDAPATVNDGTYIGFMAFMSAGAVLSLTILPASKVVRDDGTRCTHMVYSNVTTESYEILKLFYNWKMLLIVPAAWSSNFFYTYQFNHVNKPQFNLRTRGFNNVFYWGAQMLGSVAIGYVMDFSFKSRRKRGVVGICVVALLASGIWGGALANQIKRDLGVIMDFKDSGSRYAGPFVLYFSFGLLDSMFQSMVYWVIGALANDSEILSRYAGFYKGVQSAGAAVAWQIDNHKVSGMAQLIVNWVLTSVSYPLLLVLVVLAVKEDNKGEEEQAKQVAPSSVENGSVR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01260 460 PANTHER ET TRANSLATION PRODUCT-RELATED 24 442 - -
Vian4g01260 460 CDD MFS_unc93-like 26 425 - -
Vian4g01260 460 MobiDBLite consensus disorder prediction 441 460 - -
Vian4g01260 460 SUPERFAMILY MFS general substrate transporter 32 437 IPR036259 -
Vian4g01260 460 Gene3D MFS general substrate transporter like domains 251 451 IPR036259 -
Vian4g01260 460 Gene3D MFS general substrate transporter like domains 23 216 IPR036259 -
Vian4g01260 460 Pfam Ion channel regulatory protein UNC-93 51 250 IPR010291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01260 Vian-Chr4 25533232 25534825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01260 - - gmx:100796714 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01260 4 25533232 25534825 Vian4g01260 4 25533232 25534825 ECH
Vian7g01999 7 32473954 32476319 Vian4g01260 4 25533232 25534825 PCT