Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01166 ATGGGTGAGGGAGAGCGTTTCCAGCTGGGGACTGTGGGCGCGTTGACTCTTTCAGTGGTCTCATCTGTGTCCATTGTGATTTGCAATAAGGCGCTGATGAGTTCATTGCATTTTATTTTTGCTACAACTTTGACCAGCTGGCATCTGCTTGTAACATTTTGTTCCCTTCATGTGGCTCTCAAAATGAGATTCTTTGAGCATAAACCTTTTGAGCAGAAAGCTGTAATGGGATTTGGGATTTTAAATGGGATCTCAATTGGACTTTTAAATTTGAGCCTGGGGTTTAATTCTGTTGGCTTCTATCAGATGACTAAGCTGGCCATCATTCCTTGTACTGTACTGTTGGAGACCCTTTTTCTTGGGAAGAGATTCAGTAGGAGAATTCAATTTGCCCTTACTATCCTCCTTCTGGGTGTCGGGATTGCTACTGTCACAGATTTGCAGCTCAATGCTCTTGGCTCCTTCTTATCTTTTCTTGCAGTGATTACAACTTGTGTTGCTCAGATTATGACAAATACTATCCAAAAGAAGTTCAAGGTTTCTTCCACCCAGCTTCTCTATCAATCATGTCCATATCAAGCAGCAACCCTGTTAATATGCGGTCCATACCTGGATAAACTTTTAACCAACCAAAATGTATTTGGTTTCAAGTATACAACACAAGTGACGGTTTTCATTATCCTTTCCTGCCTTATCTCCATCTCAGTCAATTTTAGTACATTCCTTGTTATTGGAAAGACATCTCCTGTGACCTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTTTTGGCATTTGGTTATATACTACTCCAAGACCCATTTAGCTGGAGAAACATTCTGGGAATTATGATAGCCATGGTGGGGATGGTTTTATATTCTTACTATTGCACACTTGAGAACCAGCAAAAAACCGTTGAATCTTCATCACAAGCATCCCAGACAAGGGAAGGTGAATCGGATCCTCTGATCAATGTGGAAAATGGAAGTGCGGTTGTGAGTGATACAATTGGACAGAGACAGTTGTCTCCTGTATGGAGCAAGAGCAAAGACTAG 1056 0.4157 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFLGKRFSRRIQFALTILLLGVGIATVTDLQLNALGSFLSFLAVITTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLICGPYLDKLLTNQNVFGFKYTTQVTVFIILSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLQDPFSWRNILGIMIAMVGMVLYSYYCTLENQQKTVESSSQASQTREGESDPLINVENGSAVVSDTIGQRQLSPVWSKSKD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01166 351 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
Vian4g01166 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 294 - -
Vian4g01166 351 MobiDBLite consensus disorder prediction 308 328 - -
Vian4g01166 351 PANTHER SOLUTE CARRIER FAMILY 35 12 297 - -
Vian4g01166 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01166 Vian-Chr4 20117686 20124869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01166 1 325 Organic Solute Cotransporters AT1G21870 24.706 2.70e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01166 K15285 - gmx:100786018 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01166 4 20117686 20124869 Vian4g01166 4 20117686 20124869 ECH