Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01107 ATGGCGAAACTTGTCGTCTCTGAAGACTCGCGTTATTCCCTCTCTCACGCATTTCTCCGAGTTTCATTCCACTCCTTGTACCTGTCAAAATTGGAAGAACAAATTCAGCTCCCATATAGGAAAGGGTCAACAACAACCATCAAAGGAAAAATCAGAAGAGAAAGTTTCTCTGAGGACTTTGATGGCCAACCTGAGCAAATATTTCAAGCAACATACGGTAACAAGTGTTATACGTGGTCTTATAGCAATTGGAGCGGTTGTTCTTTTGAACATTCCACATCGGGGTTTGAATGGAGGGAAGATTCAAATAGGACAAACAAGTGGAAAAATGAAAGCGATGTTGAGCAGGATGATGATGACTCATGTTGTATGGGGTCGAGTTCCGATAGAACTATTCTTGGTCTGCCTCCAACAGGTCCATTAAAGATTGAAGATGTTAAAAATGCTTTTAGGTTATCAGCTTTAAAATGGCATCCTGATAAGCATCAAGGCACTTCCCAGAAAGAAGTGAACGATTGTTCAGTCACGGAAATTAATTTTTCGCTCCTATGGGGTGGTTTTTGA 564 0.4096 MAKLVVSEDSRYSLSHAFLRVSFHSLYLSKLEEQIQLPYRKGSTTTIKGKIRRESFSEDFDGQPEQIFQATYGNKCYTWSYSNWSGCSFEHSTSGFEWREDSNRTNKWKNESDVEQDDDDSCCMGSSSDRTILGLPPTGPLKIEDVKNAFRLSALKWHPDKHQGTSQKEVNDCSVTEINFSLLWGGF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01107 187 SUPERFAMILY Chaperone J-domain 93 179 IPR036869 -
Vian4g01107 187 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 41 170 - -
Vian4g01107 187 CDD DnaJ 132 172 IPR001623 -
Vian4g01107 187 Gene3D DnaJ domain 126 179 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01107 Vian-Chr4 17864299 17878538 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01107 - - vum:124849168 245.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01107 4 17864299 17878538 Vian4g01107 4 17864299 17878538 ECH