Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01082 ATGGCTTCTAAGATCTTCTTCCTCTTGTTTCTCCTCTTTCTGCTATACCCTCATCAACATGCGTGTGTGAATGGAGATGCCACTTTGATCAAGAGAACTTGCAAGAACACCAAGTACTACAATCTATGCTTCTCTTCCCTCAAATCGGATCCAAGTAGTCCAAACGCAGATCCTAAAGGCCTAGCTATGATTATGATCGGAATCGGAATGAGCAATGCCACCTCGACTTCTTCCTACTTGTCTTCCAAGTTGCTTAGCCCCTCCAACAACACAACCTTGAAAAGGGTCATCAAGGAGTGTGCAGATAAGTACACATATGCTGGTGATGCTCTCCAAGCTTCAGTGGAGGATTTGCTCAATGAGGCTTATGACTATGCTTACATGCACATAACTGCTGCCAAAGATTACCCAAATGCTTGTCACAACGCTTTCAAACGGTACCCTGCTTTGAGTTATCCTCTAGATCTTGCTCGCAGAGAAGATGGTTTGAAGCATATCTGTGATGTGGCAATGGGGATTATAGATAATCTTGATTGGTAG 540 0.437 MASKIFFLLFLLFLLYPHQHACVNGDATLIKRTCKNTKYYNLCFSSLKSDPSSPNADPKGLAMIMIGIGMSNATSTSSYLSSKLLSPSNNTTLKRVIKECADKYTYAGDALQASVEDLLNEAYDYAYMHITAAKDYPNACHNAFKRYPALSYPLDLARREDGLKHICDVAMGIIDNLDW 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01082 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 177 IPR035513 -
Vian4g01082 179 Pfam Plant invertase/pectin methylesterase inhibitor 29 172 IPR006501 GO:0004857
Vian4g01082 179 SMART PMEI_2 25 173 IPR006501 GO:0004857
Vian4g01082 179 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 177 - -
Vian4g01082 179 FunFam Cell wall / vacuolar inhibitor of fructosidase 2 25 177 - -
Vian4g01082 179 CDD PMEI_like 34 176 - -
Vian4g01082 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 177 IPR035513 -
Vian4g01082 179 NCBIfam pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01082 Vian-Chr4 17412654 17413193 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01082 - - gmx:100306461 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01082 4 17412654 17413193 Vian4g01082 4 17412654 17413193 ECH