Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01073 ATGCCCGGTCTGGATGGGGCACCGTACACTCTGACGCGGCGCCCGTCGAGGAGTGGCGCCACGACGTTCTCCACAGAGGTTTTCGACAATGAGGTTGTTCCGTCTGCTCTCGCTTCCATTTCTCCGATTCTCCGAGTCGCCAATGAGATCGAAAGCGAACGCCCTAGGGTTGCTTATCTATGTCGGTTCTATGCTTTCGAGAAGGCGCACCGGTTGGATCAGAGCTCCAGCGGACGTGGTGTGAGGCAGTTTAAGACGCTGCTGTTGCAGCGATTGGAGAGGGACAATGCACACAGTCTTGCCCTTCGAGTTAAGAAGACAGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTCAGAGCTCTTGACCAAGGAGAACGGGCAGACAGAGCACAGCTCGGGAAAGCTTACCAGACCGCCGGGGTGCTTTTTGAAGTTCTTTGTGCCGTTAACAAGACCGAGAAGGTCGAAGAAGTAGCTCCTGAGATCATTGCTGCTGCAAGAGATGTCCAGGAAAAGACGGAGATATATGCACCTTTCAACATTCTTCCGTTGGACTCAGCAGGGGCTTCTCAGCCTATCATGCAGCTTGAAGAGATTAAGGCAGCTGTTTCGGCGTTCTTGAATATTCATGGCCTGAATTGGCCTACTTTATTTGAGCAACAAAGGCAGAGAAATGGTGATTTGGATCTGCTTGAGTGGCTTAGAGCCATGTTTGGATTCCAGAGGGACAACGTCAGGAACCAGAGAGAGCATTTAATTCTACTTCTTGCTAATGCTCACATAAGGCTAAACCCCAAACCTGAGACCCTTAACAAGCTTGATGATCGCGCCATTGATGCAGTGATGAATAAACTGTTTAAGAATTACAAAACGTGGTGCAAATTTTTGGGACGAAGACATAGCTTACGATACCCTCAAGGTCGTCAAGAGATACAACAAAGGAAGTTACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAATGTCTTTGCTACATATTTCATAATATGGCGTATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGGTGATGAGGCATTCTTGCGCAAGGTTATAACTCCTATATACCGAGTAATAGAAAAGGAAGCTAAGAAGAGCAGACATGGAGCAGCCCCTCACTCAGCCTGGTGCAACTATGATGACCTAAATGAATATTTCTGGTCACCTGATTGCTTTTCTCTGGGATGGCCCATGCGTGATGATGGTGAATTTTTTAGATCAACATTTAATATGACACAGGGAAGAAAGGGTGTTCAAAAAACATCTGGAAGAACTGGCAAAACAAATTTTGTTGAGACCCGATCATTCTGGAACATCTTCCGCAGCTTTGATCGTCTTTGGACCTTCTATCTTCTAGTTTTGCAGATGATGTTCATTATTGCCTGGGAAGGGATTTCATTATTGGATATCTTTCAGAAAGAGGTCTTATATAAGCTCTCTAGCATATTCATTACAGCAGCCGTTCTACGCTTACTTCAAAGTATCTTGGACCTGGCTTTGAACTTTCCAGGCTATCATCGTTGGAGATTCACTGATGTCCTACGAAGTTGTCTCAAAGTCGTTGTTAGCCTTTTCTGGGTTATTGCTCTTCCACTCTTCTATGTGCATTCCTTCAAGGATGCCCCTAACTTTATGAAGGATATGCTTTCTTTTCTTCATAGTATAAAGGGGATTCCACCATTGTATATGTTTGCAGTTGCAGTTTATCTGCTTCCAAATTTACTAGCAGCTGTTCTCTTTCTTTTTCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATAGTTAGATTTCTCTTATGGTGGTCACAGATCAAACCTCTGGTTCAGCCAACTAAGGACATAATGAGTATTCGGCATGTTGATTATGCCTGGCATGAATTTTTCCCTGAAGCTCAAAATAACTATGGTGCAGTTATTGCTCTATGGGCCCCTGTACTTATGGTTTATTTCATGGACACTCAAATTTGGTATTCCATCTTTTCAACTATTTGCGGTGGTGTTATTGGAGCCTTTGATCGTCTAGGAGAGATACGCACTCTGACCATGCTGAGATCGCGGTTCCAATCATTACCTGGTGCATTCAACGCATACTTGGTTCCTACTGACAAGAAGCAGAAGAAGAAATTTTCTTTATCGAAGCGATTTGACGAGATTTCTGCAAGCAGAAGGAGTGAAGCAGCTAAATTTGCTCAGGAGATGGATCTTTTGATGGTTCCATACTCATCAGATCCAAGCTTGAAAACAATTCAGTGGCCACCTTTTCTGCTTGCAAGCAAGATTCCTATAGCACTGGACATGGCAGCTCAATTTCGAGGAAAGGACTTCGATCTTTGGAAGCGCATATGTGCAGATGAATATATGAAGTGTGCTGTAATTGAATGCTATGAATCATTTAAAAACATCCTGCATGCTTTGATAGTAGGAGAAGCTGAAACGAGGACAATCTCTGTCATCATTAAGGAAGTTGAAAACAGCATCTATAAGAATACACTTCTCACAAATTTCCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCAGATGCATCTAAACAAGGTACAGTGGTGGTCTTATTGCAAGACATGTTAGAAGTTTTTATACGTGATATGGTCGTAAATGAGAACAGTGAATTGGCAGAACTTTACCATAGTAGTAAGGATACTGGACGCCAACTTTTTGCCGGTACAGATGCAAAACCAGCTGTATTATTCCCTCCTATTAGACGTCTTTATTTACTTTTGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAATCTTGAAGCACGCAGAAGGATTGCATTCTTCACCAATTCATTGTTCATGGATATGCCACGTGCTCCACGAGTCCGAAAAATGCTATCCTTCAGTGTCTTAACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGATCTTGAGGTTGAAAATGAAGATGGCGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGAACAACTTCATGGAACGTCTTGGTTGTAAGAAAGATAGTGAGATATGGGAGAAAGATGAACACATATTACAGCTACGTCACTGGGCCTCGTTACGAGGACAAACTCTTAGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATTAAGCTTCAGGCTTTTCTTGATATGGCAAATGAAAAGGAGATACTTGATGGCTATAAAGCTGTTACTGTCCCGTCCGAGGAAGATAGAAGGAGCCATAGGTCCTTATATGCTAGTTTAGAGGCCGTTGCAGACATGAAATTTACATACGTCGCAACCTGTCAGAACTATGGGAATCAGAAGCGTAATGGAGATCGCCGTGCGACAGACATTCTGAATTTGATGGTTAACAATCCCTCACTTCGTGTGGCTTATATTGATGAAGTTGAAGAAAGAGAGGGAGGGAGAGTTCAGAAAGTTTATTACTCTGTACTAATCAAAGCTGTGGACAATCTTGACCAAGATAATTACTTGGAAGAAGCTTTAAAAATGCGCAATCTTTTGGAAGAGTTTAATGAAGATCATGGGGTGCGACGACCTACAATATTAGGTGTACGTGAACACATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCACTGAAGGTGCGATTCCACTACGGTCATCCAGATGTTTTTGATAGAATTTTCCACATAACTCGAGGAGGATTTAGCAAGGCTTCTTGTGGAATCAATTTGAGCGAGGATATTTTTGCTGGTACCCTTCTTGAAACATCTTTCTTTGTTTATGCTTTGTCCTGGATAGTGATGGTAGCTGTCATGATTATTCTTAAGATTGTGTCCATGGGTAGAAAGCAGTTCAGCGCAGACTTCCAGTTGATGTTTCGTCTTGTCAAATTGTTTCTGTTCATGGGAGCCATTGTTGTTCTAAGTTTAATGTTTACTCTGCTAAGTCTTACAGTTGGAGACATATTTGCGAGCCTCCTAGCCTTTTTGCCAACAGCATGGGCACTTATTCAGATAGCACAAGCATGCAGACCATTCGTGAAGGGCATTGGAATGTGGGGGTCTGTGAAAGCTTTAGCAAGAGGCTACGAATACTTGATGGGAGTGGTTATTTTTGCTCCGGTGGCCATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTGCTGTTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCCGGCGGCAAGAAGGATAAGAAGAACTGA 4434 0.4301 MPGLDGAPYTLTRRPSRSGATTFSTEVFDNEVVPSALASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNAHSLALRVKKTDAREIQAYYQQYYEHYVRALDQGERADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSAFLNIHGLNWPTLFEQQRQRNGDLDLLEWLRAMFGFQRDNVRNQREHLILLLANAHIRLNPKPETLNKLDDRAIDAVMNKLFKNYKTWCKFLGRRHSLRYPQGRQEIQQRKLLYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGGDEAFLRKVITPIYRVIEKEAKKSRHGAAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFRSTFNMTQGRKGVQKTSGRTGKTNFVETRSFWNIFRSFDRLWTFYLLVLQMMFIIAWEGISLLDIFQKEVLYKLSSIFITAAVLRLLQSILDLALNFPGYHRWRFTDVLRSCLKVVVSLFWVIALPLFYVHSFKDAPNFMKDMLSFLHSIKGIPPLYMFAVAVYLLPNLLAAVLFLFPMLRRWIENSDWHIVRFLLWWSQIKPLVQPTKDIMSIRHVDYAWHEFFPEAQNNYGAVIALWAPVLMVYFMDTQIWYSIFSTICGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNAYLVPTDKKQKKKFSLSKRFDEISASRRSEAAKFAQEMDLLMVPYSSDPSLKTIQWPPFLLASKIPIALDMAAQFRGKDFDLWKRICADEYMKCAVIECYESFKNILHALIVGEAETRTISVIIKEVENSIYKNTLLTNFRMGFLPSLCKKFVELVEILKDADASKQGTVVVLLQDMLEVFIRDMVVNENSELAELYHSSKDTGRQLFAGTDAKPAVLFPPIRRLYLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLGCKKDSEIWEKDEHILQLRHWASLRGQTLSRTVRGMMYYRRAIKLQAFLDMANEKEILDGYKAVTVPSEEDRRSHRSLYASLEAVADMKFTYVATCQNYGNQKRNGDRRATDILNLMVNNPSLRVAYIDEVEEREGGRVQKVYYSVLIKAVDNLDQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGFSKASCGINLSEDIFAGTLLETSFFVYALSWIVMVAVMIILKIVSMGRKQFSADFQLMFRLVKLFLFMGAIVVLSLMFTLLSLTVGDIFASLLAFLPTAWALIQIAQACRPFVKGIGMWGSVKALARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKDKKN 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01073 1477 Pfam Vta1 like 39 167 IPR039431 -
Vian4g01073 1477 Coils Coil 1207 1227 - -
Vian4g01073 1477 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1206 1313 - -
Vian4g01073 1477 FunFam callose synthase 3 25 182 - -
Vian4g01073 1477 Pfam 1,3-beta-glucan synthase component 1205 1312 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vian4g01073 1477 Pfam 1,3-beta-glucan synthase component 971 1203 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vian4g01073 1477 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 321 432 IPR026899 -
Vian4g01073 1477 Coils Coil 1472 1477 - -
Vian4g01073 1477 Gene3D - 24 187 IPR023175 -
Vian4g01073 1477 SMART FKS1_dom1_2 319 435 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01073 Vian-Chr4 17192868 17206828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g01073 1363 1477 Glycosyltransferase AT5G13000 59.130 3.27e-38 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01073 K11000 - gmx:100777245 2357.02