Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01071 ATGGCGTTCTCTGCAACTCTATCCTACACCACCTTCCCTTCGCTTCCTCGCTTCCCCCAAATTTTGAGAACAAAGAGAGTTCATTTCCGACTGATTCGTGCAGCACAGAGCGGTGAATCAGAGACCCCGGAGAGTAAGAGTGAAGGGTCATCTAAGGCTCAGTCTGCAAGTGCTTCTCCTAAGCCTCCCAAGAAACCAGTTTATTCCTTGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATTATCTTTCTGTTGGGCACCCACCTTATTACAAAGGATTAGACTACATTTATGAAGACCGTGGTGAGGTCCTGGATATGCGTATATTTGAAACAGGAGAGTATGCTCTTATTGCATGGGTAGGGATTCCCACTGCTCCAGCTTGGCTTCCTACGTACATGCTTATCAAGTCAGAGAAGCTTGACTATGAGAGGCTATGA 462 0.4589 MAFSATLSYTTFPSLPRFPQILRTKRVHFRLIRAAQSGESETPESKSEGSSKAQSASASPKPPKKPVYSLKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEYALIAWVGIPTAPAWLPTYMLIKSEKLDYERL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01071 153 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 153 - -
Vian4g01071 153 Pfam Cyanobacterial and plant NDH-1 subunit O 70 144 IPR020905 GO:0005886|GO:0016655
Vian4g01071 153 MobiDBLite consensus disorder prediction 36 69 - -
Vian4g01071 153 MobiDBLite consensus disorder prediction 38 58 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01071 - - gmx:100500669 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01071 4 17107337 17108667 Vian4g01071 4 17107337 17108667 ECH