Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01043 ATGGACCGGAGGAGTTGGTTATGGCGCAGGAAGTCATCTGAGAAAAGTCCAGGTGAAACTGAGAGTTCTGGCTCAATGTCATCTCATTCAGAAAGATTCTATGATGATCAGGTAACACCAAATGAATGTTTACCTCCCGAAGTCATGTGTGAGGAGGGTGCACCAAATAATGAAGAAGTTACTGATGTGAAGACTCTAACAGAAAAGTTATCTGCTGCTCTCTTAAACTCTAGTGCCCAAGAAGACTTGGTAAAGCAGCATGCTAAGGTTGCTGAAGAAGCTGTCTCAGGCTGGGAGAAGGCTGAAAATGAAGTATTGATTTTAAAACAACAACTTGATGCTGCAAAACAAAAAAATTCAGTTCTTGAAGACCAAATTAGTTATCTTAATGGGGCACTGAAGGAGTGTATGAGGGAGCTTCGACAAGCTAAAGACGAACAAGAGCAAAAGATTCATGAATCTGTATCAAATAACTCTTGTGGCTTGGAATCCAAAAGACCTGATCATGAGTGGGAAGCTGTTGATCCTGCTGCTTCATTTGTTCCCTCTGATCTTCACAGGAGGCTTGAGGATATGGAGAGAGAGAATTCAAGTCTTAAAGTAGAGCTACAATCTCGACTTGAGGAACTAGAGTTCAGGACCATAGAAAGGGATTTGAGTACTCAGGATGCTGAAACAGGAAGCAAGCAACATTTGGCAAGTATAAAGAAGGTGGCTAAGCTAGAAGCTGAGTGCCGGAGACTGAAAGCTGTGACACGCAAACCATTCTCTGCTAATGATCACAGGTCTTTAGCTGCTTCCTCAGTTTATGTAGAGTCATTTACTGATAGCATGTCAGATATTGAAGAGAGGCAACTAGTACTTGAAAGTGATATTCCGAAATTGGGAGGCTGGGATATGAATGAAGCTGAATCAAACCGCTATGGCTCATGCTCATCAGCTGTAACTACAGAACTTGATCAATTTAAGAATGAAAACAGTGCCGGAAAAAATCATACGGTCTTTTCAACTGACATCAATCTGATGGATGATTTCCTTGAAATGGAGAGGCTTGCTGCATTGCCAGATACTGAAAGTGTTAGTAGCTTTCCTGTGGTAAATCCTGCATCTGACCAACTCAGTGTTGTAAAGAAACTAGAAAATGCTGATATGGAAGGTATGGTTCAAAAGAATGTTGCATTGGAAAAGAAACTAGAGAAAATGGAGGCAGAGAAACTTGTGCTAGAGATGGATCTAACTGAGTGCCAAAAGCAGCTTGAAGCATCATTGAGCAGAATAAACGAAGTGGAGTTAGAGGTAGTAGAGCTTCAAACTAAGTTAGCTCTTGCAAACAAATCAAATGAAGAAGCATATGAAAAACTAAAAGCAACTCAGGAAAAGAAAAAGATAGCTGAGTCTAAACTCACAGCTGCACACACCGAAGCAGAAGAATTGGTCTCAAAAATCTGTTCATTAGAAGAAGAGATTGAGAAAGAGCGAGTTCTGTCAGCAAAGAATTTGGCCAAATGTGAGAAGTTGGAGGATGAGCTCCTGCGAATCAAGCATGAAGCTCAACTCCAGCAAAACACTGAGATTCTGTCCGGAGAAGGTGTTAATAGTGAGCTAAAGCAGGAGAAGGAACTAGCATTGGCTGCTACTAAATTTGCTGAATGCCGAAAAACCATTGAATCTCTTGGACTGCAGTTGAAGTCCCTTGCAACATTGGAAGACTTTCTACTTGATTCAGAGAGCTCTATGGATTTTGAAGTTACACCAGGTCCTCAAAATGGTGATGAGCAGTTGAAGAACTTACCTAGTAATTTGAGTTTGATCAAAAGAGATTCTGAACCATCAGTTTCTCTAAACCAATTATCATCTATAACCCATGAAAAAACCCATAATGGTTTTGGTAGGTTCAACTCTAGAAGCAAAAGTGTAAGTAAAACAAGAGGTCACTGA 1938 0.4061 MDRRSWLWRRKSSEKSPGETESSGSMSSHSERFYDDQVTPNECLPPEVMCEEGAPNNEEVTDVKTLTEKLSAALLNSSAQEDLVKQHAKVAEEAVSGWEKAENEVLILKQQLDAAKQKNSVLEDQISYLNGALKECMRELRQAKDEQEQKIHESVSNNSCGLESKRPDHEWEAVDPAASFVPSDLHRRLEDMERENSSLKVELQSRLEELEFRTIERDLSTQDAETGSKQHLASIKKVAKLEAECRRLKAVTRKPFSANDHRSLAASSVYVESFTDSMSDIEERQLVLESDIPKLGGWDMNEAESNRYGSCSSAVTTELDQFKNENSAGKNHTVFSTDINLMDDFLEMERLAALPDTESVSSFPVVNPASDQLSVVKKLENADMEGMVQKNVALEKKLEKMEAEKLVLEMDLTECQKQLEASLSRINEVELEVVELQTKLALANKSNEEAYEKLKATQEKKKIAESKLTAAHTEAEELVSKICSLEEEIEKERVLSAKNLAKCEKLEDELLRIKHEAQLQQNTEILSGEGVNSELKQEKELALAATKFAECRKTIESLGLQLKSLATLEDFLLDSESSMDFEVTPGPQNGDEQLKNLPSNLSLIKRDSEPSVSLNQLSSITHEKTHNGFGRFNSRSKSVSKTRGH 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01043 645 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 636 - -
Vian4g01043 645 MobiDBLite consensus disorder prediction 144 164 - -
Vian4g01043 645 Coils Coil 503 523 - -
Vian4g01043 645 Coils Coil 98 157 - -
Vian4g01043 645 MobiDBLite consensus disorder prediction 607 645 - -
Vian4g01043 645 MobiDBLite consensus disorder prediction 1 17 - -
Vian4g01043 645 MobiDBLite consensus disorder prediction 1 60 - -
Vian4g01043 645 Pfam Filament-like plant protein, long coiled-coil 184 254 IPR008587 -
Vian4g01043 645 Pfam Filament-like plant protein, long coiled-coil 306 361 IPR008587 -
Vian4g01043 645 Pfam Filament-like plant protein, long coiled-coil 383 567 IPR008587 -
Vian4g01043 645 Pfam Filament-like plant protein, long coiled-coil 80 166 IPR008587 -
Vian4g01043 645 MobiDBLite consensus disorder prediction 607 637 - -
Vian4g01043 645 MobiDBLite consensus disorder prediction 18 34 - -
Vian4g01043 645 Coils Coil 189 209 - -
Vian4g01043 645 Coils Coil 384 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g01043 Vian-Chr4 16440875 16443815 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01043 - - var:108331982 1222.22