Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g01022 ATGGAACCAAACGAGAACGGAGGCAGCACCAGCAGAGAGGAACAAGAAGAGGCATTGGTCGCTTTGATCGAACACCGAACCCGCGAAGTCAAAAACCTCCGTCACCGCTTCGCTTATTACAAAACCCAGCTTCATGATGCGGAGAAAAGGTTGCAAGATTCTGAATCCAAATTGGCTCGCCTTCGAGGTCAGACTAATGCAGTGTCATCCCGAAATACCTTCGATGATGGAATTAAAACAGTGAAGATAGAGCGCAGATCAAATAGTCCCATTGATAGAAATGAAGGTTCTATCAAAAACCTACATCAATCTAAACCAGAACTTCTTATTCCTTCAGTGAATCCAAAAATTTCACAACCTGTATTGTTGCCAAAACCTTCTTCAAAAGCTTCAGTAAGTTCCAATTCTGAGGCCACTCCTGGAATTCATAATTCTCCAATCACAGGTGATAGCTCTAGGGGAAAATATGACAAGTCCCATAGACTTTCTTCTGACCAGCAAAAAACCGAAATCAAGGACAAAGGGACAAAAAGGAAATTTGAACAAAAAGAACACAAGGAATTGATTCCTTTAATACGCAAGAGTTCTTCACCAAGCTTAGTACACTCTCAAACAAGCAACCACGTCTCAAGTCAACACAAGAGGAAATTGCGGAGTATTGCTTTGTGCCCAGTGAATGATCAGCTTTTTGTGACTAGTGCTCTGGATGGAATGGTCAACTTCTGGCAAATTCAGGCTAAGGGAGCAGGAGCCTCTCGTCTTAGCACCACAGATTGTGCATCCCAAAAGCAGAGGAGGTGGCCTGAAGATTTAGTTTGGCACCCAGAAGGAAACAGCCTATTTGCAGTATACAGTGCTGATGGTGGCGACTCTCAAGTATCGATTACAAATCTGAATAAAGGACAAGAAGGGGGAGAACGCGTAAAGTTCTTAGAGGACAAGCCTCATGTTAAGGGAATTATCAATGGCATTGTTTTTATGCCATGGGAAAATACATGTTTTGTAACTGGTGGAAGTGACCATGCTGTTGTACTTTGGAGTGAGCAGGAGGGTGAAAAGTGGAAACCAAAGGCGTTGCATAGGAATCTTCACTCATCTGCTGTCATGGGAGTTGCCGGTATGCAGCACAAGCAGATGGTGTTATCTGTTGGTGCAGATAAGAGGATATTTGGGTATGATGTTCGAGTAGGAAGAGCAGATTTCAAGCATCAGGTTGATAGCAAATGCATGAGTGTGCTGCCCAATCCCTGTGACTTCAATTTGTTCATGGTTCAAACAGGGACCCATGAGAGGCAGCTTCGGTTGTTTGATATTAGATTGAGGAATACAGAACTTCATGCTTTTGGATGGAAGCAAGAAAGCAGTGATTCTCAATCAGCTCTGATAAATCAGTCTTGGTCTCCTGATGGACTATACATAACATCTGGTTCCGCAGATCCTGTGATTCATATATTTGATATAAGGTATACTGCCCACAAGCCTTCCCAATCTATAAGAGCACATCAGAAACGAGTCTTCAGAGCCATGTGGCTTCAGTCCATTCCTCTTGTCATTTCCATATCATCCGATCTTAACATTGGACTGCACAAAGTTTACGCATGA 1602 0.4307 MEPNENGGSTSREEQEEALVALIEHRTREVKNLRHRFAYYKTQLHDAEKRLQDSESKLARLRGQTNAVSSRNTFDDGIKTVKIERRSNSPIDRNEGSIKNLHQSKPELLIPSVNPKISQPVLLPKPSSKASVSSNSEATPGIHNSPITGDSSRGKYDKSHRLSSDQQKTEIKDKGTKRKFEQKEHKELIPLIRKSSSPSLVHSQTSNHVSSQHKRKLRSIALCPVNDQLFVTSALDGMVNFWQIQAKGAGASRLSTTDCASQKQRRWPEDLVWHPEGNSLFAVYSADGGDSQVSITNLNKGQEGGERVKFLEDKPHVKGIINGIVFMPWENTCFVTGGSDHAVVLWSEQEGEKWKPKALHRNLHSSAVMGVAGMQHKQMVLSVGADKRIFGYDVRVGRADFKHQVDSKCMSVLPNPCDFNLFMVQTGTHERQLRLFDIRLRNTELHAFGWKQESSDSQSALINQSWSPDGLYITSGSADPVIHIFDIRYTAHKPSQSIRAHQKRVFRAMWLQSIPLVISISSDLNIGLHKVYA 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g01022 533 MobiDBLite consensus disorder prediction 120 187 - -
Vian4g01022 533 SUPERFAMILY WD40 repeat-like 215 528 IPR036322 GO:0005515
Vian4g01022 533 Gene3D - 123 409 IPR015943 GO:0005515
Vian4g01022 533 MobiDBLite consensus disorder prediction 153 187 - -
Vian4g01022 533 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 6 531 - -
Vian4g01022 533 MobiDBLite consensus disorder prediction 124 152 - -
Vian4g01022 533 SMART WD40_4 304 347 IPR001680 GO:0005515
Vian4g01022 533 SMART WD40_4 491 530 IPR001680 GO:0005515
Vian4g01022 533 SMART WD40_4 449 486 IPR001680 GO:0005515
Vian4g01022 533 SMART WD40_4 203 243 IPR001680 GO:0005515
Vian4g01022 533 SMART WD40_4 353 393 IPR001680 GO:0005515
Vian4g01022 533 Pfam WD domain, G-beta repeat 463 486 IPR001680 GO:0005515
Vian4g01022 533 Coils Coil 44 64 - -
Vian4g01022 533 Gene3D - 410 532 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g01022 - - gmx:100799587 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g01022 4 15805929 15811172 Vian4g01022 4 15805929 15811172 ECH