Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00966 ATGGGAGGTGGTAAATCCAGATCTTTCATTCTAGTGCTCTTTCTATTTGTGTTCTTCTGTGTTTTTGCAAGGGCGCAACAACAGCAACCTATAAAAAACGTTGTTGTTTTGGTTATGGAGAACCGTTCCTTTGACCACATGCTGGGGTGGATGAAAGAGAGAATCAACGCGTTAATCAATGGGGTCACGGGAGATGAATGCAACCCTGTTTCTACTACAGGTTCGAAGCAAGATTCGATTTGCTTCACTGATGATGCAGAGTTTGTGGATCCGGATCCTGGGCATTCATTTGAAGATGTGTTGCAGCAGGTATTCGGGTCTGGTTCGATCCCTTCCATGAATGGATTTGTGGAGCAAGCATTGTCCGTGTCTCATAACCTCTCTGAGACTGTAATGAAAGGGTTTAAGCCCGAGGCTGTGCCGGTTTATGCTGCTTTGGTTAAGGAATTTGCTGTTTTTGATAGGTGGTTTTCTTCAATTCCTGGTCCAACACAACCCAATAGGCTTTTTGTGTACTCAGCAACCTCTCATGGTTCCACAAGTCATGTCAAGAGGCAGTTAGCGAAAGGGTACCCTCAAAAAACCATCTTTGATTCTCTGCATGAGAATGGCCTGGACTTTGGGATTTACTTTCAGAACATACCCACAACTTTGTTCTATAGGAATCTGAGGAAATTAAAGTATGTATTCAAGTTCCATCAGTATGATTTGAAGTTCAAGAGAGATGCCCGAAATGGGAAACTTCCACCCTTGACTGTGATTGAGCCTAGATACTTTGACTTGAAGGGCTTACCCGCTAATGATGACCACCCATCTCACGATGTTGCACATGGCCAAATGCTGATTAAGGATGTTTACGAGGCTCTAAGAACCAGCCCTCAGTGGAATGAAACACTTTTCATCATTACATATGATGAACATGGTGGATTTTTTGATCATGTGAAGACCCCTTTTGTCAACATTCCTAATCCAGATGGGAACACCGGACCTGCTCCCTATTTCTTCAAGTTCGATAGGTTAGGGGTTCGGGTTCCTACTATTATGATCTCTCCTTGGATCAAGAAAGGAACTGTGATAAGTGGTGCCAAAGGACCTGCTGAAAACTCAGAATTTGAGCACTCTTCTATTCCTGCAACCATAAAGAAGATCTTCAACCTTTCCTCCAACTTTTTGACCCACAGGGATGCTTGGGCTGGGACATTCGAGCATGTTGTTGGAGAGTTAAGTTCACCCAGAACGGATTGCCCAGTGACTTTGCCGGACGTGAACCCTCTAAGGAGCACTGAAGCAAAAGAAGATGCAGGCCTGTCTGAATTTCAGAGTGAGGTAGTTCAATTGGCAGCAGTTCTTAATGGGGATCATTTCTTGAGCAGTTTCCCTGATGAAATGAGCAAGAAGATGAGTGTGAAAGAAGCTCATGAGTACGTTCGAGGAGCTGTCTCAAGGTTCATAAGAGCTAGCAAAGAGGCCATCAAGTTAGGGGCTGATGAATCTGCCATTGTGGATATGAGATCCTCTCTCACTACTAGGTCTTCAGTTCATAATTAA 1548 0.4399 MGGGKSRSFILVLFLFVFFCVFARAQQQQPIKNVVVLVMENRSFDHMLGWMKERINALINGVTGDECNPVSTTGSKQDSICFTDDAEFVDPDPGHSFEDVLQQVFGSGSIPSMNGFVEQALSVSHNLSETVMKGFKPEAVPVYAALVKEFAVFDRWFSSIPGPTQPNRLFVYSATSHGSTSHVKRQLAKGYPQKTIFDSLHENGLDFGIYFQNIPTTLFYRNLRKLKYVFKFHQYDLKFKRDARNGKLPPLTVIEPRYFDLKGLPANDDHPSHDVAHGQMLIKDVYEALRTSPQWNETLFIITYDEHGGFFDHVKTPFVNIPNPDGNTGPAPYFFKFDRLGVRVPTIMISPWIKKGTVISGAKGPAENSEFEHSSIPATIKKIFNLSSNFLTHRDAWAGTFEHVVGELSSPRTDCPVTLPDVNPLRSTEAKEDAGLSEFQSEVVQLAAVLNGDHFLSSFPDEMSKKMSVKEAHEYVRGAVSRFIRASKEAIKLGADESAIVDMRSSLTTRSSVHN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00966 515 Pfam Phosphoesterase family 31 386 IPR007312 GO:0016788
Vian4g00966 515 FunFam non-specific phospholipase C6 22 193 - -
Vian4g00966 515 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 24 486 IPR007312 GO:0016788
Vian4g00966 515 FunFam Non-specific phospholipase C1 247 434 - -
Vian4g00966 515 Gene3D Alkaline Phosphatase, subunit A 22 193 IPR017850 -
Vian4g00966 515 Gene3D Alkaline Phosphatase, subunit A 261 434 IPR017850 -
Vian4g00966 515 SUPERFAMILY Alkaline phosphatase-like 146 382 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00966 Vian-Chr4 14241035 14243416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00966 6 510 Acyl Lipid Metabolism Gene Families AT3G48610 78.405 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00966 K01114 - gmx:100786332 966.452