Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00941 ATGGGGAAGAAGACGAAGAAACCCGGTAAAGGCAAAGAGAAAACTGAGAGAAAAACCGTAAAAGCCGAAGAGAAGAAAGCTCGCAGGGAAACCAAGAAGCTTTCTCCCGAGGACGATATCGACGCCATTTTGTTGAGCATTCAAAAGGAGGAAGCGAAGAAGAAGGAGGTTCACGTCGACGACAACGTTCCCGCGCCTTCTCCTCGCTCCAACTGCTCGCTCACCGTCAATCCGTTGAAAGAGACCGAGTTGATTCTCTACGGCGGCGAATTCTACAATGGCAACAAGACCTTCGTGTACGGCGATCTCTTCCGGTATGACGTGGAGAAGCTGGAATGGAAATTGGTTTCGAGTCCTAATAGTCCTCCTCCGCGCAGTGCTCACCAAGCGGTTGCGTGGAAGAATTATATTTATATTTTTGGTGGTGAGTTTACGTCTCCAAACCAAGAGCGGTTTCATCACTACAAGGATTTTTGGATGTTGGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTGAAAGGGTGCCCTAGTCCTCGTTCAGGACATCGAATGATATTGTACAAGCACAAGATTATTCTTTTCGGTGGCTTCTATGACACTCTCCGAGAAGTGAGGTACTACAATGATCTATTCGTATTTGACCTTGATCAATTCAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCAACTGCACGTAGTGGTTTTCAATTATTTGTTTACCAAGATGATATATTTTTGTATGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAACAACTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCACTCGATCCTAAGACTTGGGAATGGAACAAGGTGAAGAAAAGTGGAATGCCTCCTGGTCCCCGTGCTGGGTTTTCAATGTGTGTTCATAAGAGGAGGGCTCTGCTATTTGGTGGCGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTTTTGAATGAATTTTACGGGTTTCAGTTAGACACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCCACAAAAGATAAGTTAAAAAAATCTGAACAAAATTGTCCTGATGATGTCAACAAGAAGATAAATCCAGCATGTACAACAAGAGAAGAAACTGTGGAGTCAGAGGATGAAGAAAGTAACATTGATGATATATCCAAAAATATAGCATCAAACATGTCTATTGTTGATAGTGAAAATCTTACCAACTCTGATGGAAAGCCCAAGGAATCTGGTGCTAAATTGGACATTCAAAGTTCTTTGCCTGAGGTAGTGAAGCCATGTGGTCGTATTAATGCTTGCATGGCAGTTGGAAGGGACACGTTATATATATATGGTGGAATGATGGAGATTAAAGATCAAGAAATCACTCTTGACGATCTGTATTCTTTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCTTCAGAATCTGAATGGGTGGAAGCTTCAGAAGATGATGAAGAAGATGAAGATGGTGATGAAGATGAGTCCGATGGTGAGACTTCAACTAATGAGGATGATGATGAGGAAGAGGAGGAGGAAGAGGCTCAGAATGCATCAGTTGAGGTGGGAGATGCTGTTGCTCTAATCAAAGGTGTTGGAAAGAATCTGCGGAGGAAAGAAAGGAGGTCACGGATAGAGCAGATTAGAGCCAGTCTTGGCTTGTCCGATTCACAGAGAACACCAATGCCAGGAGAATCCCTGAGGGATTTCTACAGGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTCCGCAAGGATGGTTTTGATCTCGCTGAAGCACGGTACAGGGAGCTAAAACCTATTCTTGACGAGCTGGCTCTATTAGAAGCTGAGCAGAAGGCTGAGGAGGCTGAAGGGCCAGAAGCTAGTGTAAAGAAAAGAGGAAAGAAGAAAACTAGAAATTGA 1983 0.4317 MGKKTKKPGKGKEKTERKTVKAEEKKARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVDDNVPAPSPRSNCSLTVNPLKETELILYGGEFYNGNKTFVYGDLFRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMILYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTARSGFQLFVYQDDIFLYGGYSKEVSSDKNNSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNEFYGFQLDTNRWYPLELRKEKSTKDKLKKSEQNCPDDVNKKINPACTTREETVESEDEESNIDDISKNIASNMSIVDSENLTNSDGKPKESGAKLDIQSSLPEVVKPCGRINACMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASEDDEEDEDGDEDESDGETSTNEDDDEEEEEEEAQNASVEVGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPEASVKKRGKKKTRN 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00941 660 Pfam Galactose oxidase, central domain 135 185 - -
Vian4g00941 660 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Vian4g00941 660 Gene3D - 42 368 IPR015915 GO:0005515
Vian4g00941 660 Pfam Domain of unknown function (DUF4110) 569 652 IPR025183 -
Vian4g00941 660 MobiDBLite consensus disorder prediction 12 35 - -
Vian4g00941 660 Pfam Galactose oxidase, central domain 186 228 - -
Vian4g00941 660 Pfam Galactose oxidase, central domain 446 488 - -
Vian4g00941 660 Pfam Galactose oxidase, central domain 68 122 - -
Vian4g00941 660 MobiDBLite consensus disorder prediction 491 538 - -
Vian4g00941 660 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 653 - -
Vian4g00941 660 MobiDBLite consensus disorder prediction 1 35 - -
Vian4g00941 660 MobiDBLite consensus disorder prediction 494 534 - -
Vian4g00941 660 MobiDBLite consensus disorder prediction 638 660 - -
Vian4g00941 660 Pfam Kelch motif 235 297 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00941 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 2.87e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00941 - - gmx:100818228 1122.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00941 4 13674827 13690001 Vian4g00941 4 13674827 13690001 ECH