Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00940 ATGGGAAGAGATCTCTCTCAAACTTCAAAACTCAGAGCCTTCACAAACTCCTTCTCCCATATGGAGAAAGCCCTAAACGAGGCCGTTTCCAAGAGCTTTCTGGGCTCCTACTTCAAGTTGGAACAGAGGAAAAGTTGCTTCACGAGGGAGCTTCGTGCTGCCATCGCAACTTTTCTTACCATGGCTTACATCATCACCGTCAACGCCACCATCATCGGTGCCTCCGGCGGAACATGCTCCGTCGCCGACTGCTCCTCTCCGGCGGGCCCGGACTGCAGGGTGAAGCCCAACGTTGGGTACGAGAGTTGTCTTGCCAAGACCAAGAGTGACTTGGTTGTGGCCACTGCCGTTTCTGCTCTTGTTGGTTCTGTTGCCATGGGCCTGTTGGCTAACCTTCCTTTGGGCCTGGCTCCGGCCATGGGGCCCAATGCTTACTTGACTTTTAATTTGGTTGGTTTTCATGGAACCGGGTCAATGTCGTATCAAACTGCGTTGGCTGTGGTTTTGGTTGAGGGTTGTGCTTTTCTGTTTATATCTGCTGTTGGGTTGAGGGGGAAGCTTGCCAAGCTCATCCCTCATTCAGTGAGGCTCGGCTGTGCAGCTGGGATTGGGCTTTTCATCGCCTTTACGGGCCTGCAGTCAAGCCTTGGCGTTGGGCTTATTGGGCCCGACCCTTCCAACCTGGTTACCATCACGGCCTGCAAGATCGTAGACCCAGAAACCGGGGCTTGCTTGGGTGGGAAACTGCAAAGCCCAAAGTTCTGGCTGGGCATGGTTGGCCTCCTGATTACGAGCTATGGACTGATGAAGAATATCAAGGGAAGCATGATCTATGGCATTGTTTTTGTGACGCTTGTGTCTTGGTTTAGGCACACAGAAGTTACTTATTTTCCTGACACCCCAGTTGGTGATGAAAGTTATGAGTATTTCAAGCAAGTGGTTGGTTTTCACAAGATTGAATCCACTGCTGGAATGATAAGGTTTAGTGATTTTAACGAAAAGGGAGTTTGGGTGGCTTTGGCTACTTTGTTCTACGTTGATGTGCTTGCGATCACTGGGACTATGTACACGATGGCAGAGATTGGTGGGTTTTTGGATGAAAAGGGGCATTTTGAAGGTGAGTACGTGGCTTACATGGTTGATGCAGGAAGCACGATCGTGGGTTCTGCATTGGGTGTGTCAAGCACAGCAACATTTGTGGAATCATCGGCTGGTTTGAGAGAAGGGGGTCGAACTGGACTAACAGCAGTTTTGGTTGGGTTCTTCTTCTTCTTGTCACTGTTTTTTACTCCTCTCTTGTCTAGTGTTCCTCCTTGGGCTATAGGACCTTCACTTGTGATGGTTGGAGTGATGATGATGAAGGTGGTGAAGGACATAGATTGGAACAACACCAAGGATGCTGTGCCTGCTTTTGCCACAATGCTCCTCATGCCTCTCACATATTCCATAGCAAATGGGATCATTGCTGGGATTGGACTCTACATTGCTCTCAGCCTCTATGATTATGCTGCAAGCATTGTACATTGGTTGAGGAAGATGAGGAGAATGGTGGCCAAGGAACAAAACCAAGTTTCTGCTACTGCAGCAGTGGAAATAGTATGA 1602 0.4919 MGRDLSQTSKLRAFTNSFSHMEKALNEAVSKSFLGSYFKLEQRKSCFTRELRAAIATFLTMAYIITVNATIIGASGGTCSVADCSSPAGPDCRVKPNVGYESCLAKTKSDLVVATAVSALVGSVAMGLLANLPLGLAPAMGPNAYLTFNLVGFHGTGSMSYQTALAVVLVEGCAFLFISAVGLRGKLAKLIPHSVRLGCAAGIGLFIAFTGLQSSLGVGLIGPDPSNLVTITACKIVDPETGACLGGKLQSPKFWLGMVGLLITSYGLMKNIKGSMIYGIVFVTLVSWFRHTEVTYFPDTPVGDESYEYFKQVVGFHKIESTAGMIRFSDFNEKGVWVALATLFYVDVLAITGTMYTMAEIGGFLDEKGHFEGEYVAYMVDAGSTIVGSALGVSSTATFVESSAGLREGGRTGLTAVLVGFFFFLSLFFTPLLSSVPPWAIGPSLVMVGVMMMKVVKDIDWNNTKDAVPAFATMLLMPLTYSIANGIIAGIGLYIALSLYDYAASIVHWLRKMRRMVAKEQNQVSATAAVEIV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00940 533 Pfam Permease family 107 486 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vian4g00940 533 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 21 525 IPR045018 GO:0015205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00940 Vian-Chr4 13660596 13662197 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00940 K06901 - gmx:100808299 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00940 4 13660596 13662197 Vian4g00940 4 13660596 13662197 ECH