Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00935 ATGAAACGGTTTTTCAAAGTAGTGGAGAAAGATTCAGATGGGTCTTCGAAGAAGCCAAGAGAGACTGAGAATGATGCCGAAAATGAAGAGAACAAGAAGAAGGAACCTTTGAAGTTTATGACATGGAATGCCAACAGCTTTCTTCTTCGGGTCAAAAACAACTGGCCCGACTTCACCAACCTCATCACCACTTTTGATCCTGATGTCATTGCCATTCAGGAAGTTCGGATGCCTGCTGCAGGAGCAAAGGGTGCATCTAAAGTTCCGGGGGAAATAAAAGATGATACAAGCGCAGCCAGAGAAGAAAAAAAGGTATTGATGCGTGCACTCTCTGCTCCACCTTTTGGCAACTATCAAGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACAGCACTACTTGTGAAAAAATGCTTCAAGCCAAAAAGTGTTGTTTTCAATCTTGATAAATTAGCTTCAAAACATGAACCAGATGGTCGAGTGATCCTAGTTGAATTTGAAACACTCCGTTTATTGAATACGTATGTACCAAACAACGGATGGAAAGAGGAGGCAAACTCGTTTCAAAGGAGAAGAAAATGGGACAAAAGGATTCTAGAATTCGTTACACAAAATTCAGACAAGCCTTTAATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATTGACGTAAGTCATCCCGAGTTTTTCAGTACAGCAAAACTCAATGGTTATATCCCTCCAAATAAAGAGGATTGTGGCCAACCTGGGTTTACCTTGGCTGAAAGAAGACGATTTGGTACCATCTTAAGAGAGGGAAAGCTGGTGGATGCTTATAGATTTCTGCACAAGGATAAGGACATGGAACGAGGTTTCTCATGGTCAGGAAATCCAGTTGGAAGGTATCGTGGAAAACGGATGAGAATAGACTATTTTTTAGTTTCAGAGACCCTTAAAGAAAGGATTGTTGCATGTGAAATACAAGGACATGGGATAGAGTTAGAAGGTTTCTATGGAAGTGATCATTGTCCCGTTACCTTAGAACTCTCTCCTAGTTCTGACCCTCAAAATGAGGATGCAACATAA 1071 0.4146 MKRFFKVVEKDSDGSSKKPRETENDAENEENKKKEPLKFMTWNANSFLLRVKNNWPDFTNLITTFDPDVIAIQEVRMPAAGAKGASKVPGEIKDDTSAAREEKKVLMRALSAPPFGNYQVWWSLADSKYAGTALLVKKCFKPKSVVFNLDKLASKHEPDGRVILVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSTAKLNGYIPPNKEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSWSGNPVGRYRGKRMRIDYFLVSETLKERIVACEIQGHGIELEGFYGSDHCPVTLELSPSSDPQNEDAT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00935 356 CDD Ape1-like_AP-endo 37 344 - -
Vian4g00935 356 Pfam Endonuclease/Exonuclease/phosphatase family 40 337 IPR005135 GO:0003824
Vian4g00935 356 FunFam DNA-(apurinic or apyrimidinic site) lyase 10 346 - -
Vian4g00935 356 PANTHER AP ENDONUCLEASE 22 345 IPR004808 GO:0004518|GO:0006281
Vian4g00935 356 Gene3D Endonuclease/exonuclease/phosphatase 5 346 IPR036691 -
Vian4g00935 356 NCBIfam exodeoxyribonuclease III 37 344 IPR004808 GO:0004518|GO:0006281
Vian4g00935 356 MobiDBLite consensus disorder prediction 1 34 - -
Vian4g00935 356 SUPERFAMILY DNase I-like 37 344 IPR036691 -
Vian4g00935 356 ProSiteProfiles AP endonucleases family 1 profile. 37 346 IPR004808 GO:0004518|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00935 - - gmx:100817167 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00935 4 13500265 13506037 Vian4g00935 4 13500265 13506037 ECH