Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00933 ATGGCAGCTGCAAGTAGCATCATCTCCATCTCCTCTGCGTCACTCTTCACTCCAACAACACCTCAACCAAAAACCCATTGCCTCCTCAAACACACCAAGGACAATGATCATCTTCCAACATCATCCTTCACTACTCTTTCTTCTCTTAGGATATCAAAACCAACATCAACCTTTGGAGTCACTTCAACCACAAGGGTCAATATTCCTCCTCGTAGGTTGAGTTGTTCGGCCTCTGCATCTTCCTCTTCCACTCTTCCCTCGGCTCTTCTATTTGACTGTGATGGAGTCCTTGTAGATACTGAGAAAGATGGTCACCGCATTTCTTTCAACCAAACCTTCCAAGAAAGAAATCTGGGAGTTACATGGGATGTGGACTTGTATGGAGAATTGCTCAAAATTGGAGGTGGAAAAGAAAGGATGACAGCATACTTTAACAAGACAGGTTGGCCTGCGAATGCCCCAGCAGGTGAACAAGAAAGAAAAGAATTCGTTGCTTCTCTTCACAAACAAAAGACTGAACTATTCATGGTTCTTATTGAGAAAAAACTGTTGCCTCTTCGTCCAGGTGTCGCAAAGATTATCGATCAGGCTTTTGCTCAAGGAGTCCAAGTTGCAGTTTGCAGCACTTCCAATGAAAAGGCGGTCTCTGCAATAGTATCATTCTTGCTGGGACCTGAGAGAGCAGAAAAAATCAAGATATTTGCAGGAGATGTGGTTCCCCGTAAAAAGCCTGATCCAGCCATCTATCTGTTAGCAGCCAGCACTCTGGGTGTTGAACCTTCAAGATGTGTTGTGGTGGAGGACAGTGCCATAGGCCTAGCAGCTGCTAAAGCAGCTGGAATGACATGTATTGTAACAAAGAGCGGCTACACAGAAGATGAAGATTTCTTAAATGCAGATGCAGTGTTTGATTGCATTGGAGATCCTCCTGAGGAGAGATTTGATTTGGCATTCTGTGGTAGCCTTCTTGAGAAGCAATATGTGAGCTAG 990 0.4444 MAAASSIISISSASLFTPTTPQPKTHCLLKHTKDNDHLPTSSFTTLSSLRISKPTSTFGVTSTTRVNIPPRRLSCSASASSSSTLPSALLFDCDGVLVDTEKDGHRISFNQTFQERNLGVTWDVDLYGELLKIGGGKERMTAYFNKTGWPANAPAGEQERKEFVASLHKQKTELFMVLIEKKLLPLRPGVAKIIDQAFAQGVQVAVCSTSNEKAVSAIVSFLLGPERAEKIKIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKAAGMTCIVTKSGYTEDEDFLNADAVFDCIGDPPEERFDLAFCGSLLEKQYVS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00933 329 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 84 312 - -
Vian4g00933 329 FunFam HAD family hydrolase 179 302 - -
Vian4g00933 329 Pfam Haloacid dehalogenase-like hydrolase 89 285 IPR041492 -
Vian4g00933 329 SUPERFAMILY HAD-like 87 308 IPR036412 -
Vian4g00933 329 CDD HAD_CbbY-like 91 288 - -
Vian4g00933 329 Gene3D - 88 305 IPR023214 -
Vian4g00933 329 NCBIfam HAD-IA family hydrolase 168 285 IPR006439 -
Vian4g00933 329 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 48 326 IPR044999 GO:0016787
Vian4g00933 329 Gene3D Putative phosphatase; domain 2 100 184 IPR023198 -
Vian4g00933 329 SFLD phosphoglycolate phosphatase 84 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00933 Vian-Chr4 13478172 13481744 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00933 - - pvu:PHAVU_009G169900g 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00933 4 13478172 13481744 Vian4g00933 4 13478172 13481744 ECH