Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00931 ATGGCTGATGATAATCACCGTGGCGTGAGACTGCTATCCCGCCCGAAGCAACTCAACACCAAAGGATCCGACCCGGGAATCCATTCCTGGCTCGTTGGATCCCCGTTCCTCCCGCCGCTCACCGTCGCTTCCTTTCTCCGATGTATCCATTCTCTCCCCTCCTCCTCCTCCTCGCCCGATTTCCTCAAGGAATCGGAGGACCTGCGCACACTCCTCCCTAAAGGTTTCGAAATCATCGGAGCCGTAGCCTCCGGCGAGGATTCCGACGCTCGTGCGGCCGTGGACGCCGCTAGTTCATTACGGAAACTTCTCTATCGGGAAGGAACGGATCGCCCGCTGATTGGAGCTGTTTGCGGTTCAGATTCTGGCGATATGCGGTTTTTTGTGTCTGAGAGTGGGAATACGACTAGCCTTGAGGCTGTTCCATCGGTAATAGAGGAACGGGATTCGGAGAAGTGTTTGTGGGAGAATGCTTGCCTGCTTCGTTGTGAGCTTCCGATTAAGTTGCCACTCTATTATGCTCCCAAAAATCCAACCGATGTTGAGAAGGCATATGTACAAGCTGTTGAAGCTCTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACATGTTAGAAACAACAAACAAAACCTCTCTGGATATACCTCTTCCTGTCATAATTAGAGGTGTACAATTAGACTTTTATGCAGACCTCTCCAAGATCAAGACTTTGGCTGATGATGAGGACGGCTCTGATGCAAGCTCACTATCGTGTTCATACTTTTCCAATCGCAGTAAAGCAGGCTCACCAGTTTTTTCTGCAGAGAATGCAGATACTATCCAAGTTAGTGTTCTCTTTAATAGCTTCGGGACATCATCAGCTTCTACTGTACCTGTTGCAGAATACTTGCCAGTTGAGGATGAAGCTAGACTCCTTGTTGTGGATATTAAGCTAGATGTACTCTGCTATTCTTCGAGGGAGCTTCCACTAAAATATGCAGTTTCAAGTTTAATCATACCTGGCTTAGTTGACCAGTTAAATACAGTGCAGAAGTTAATGTTGCCTAACCTTTTGGCACAACTTCCCCAGCCAAAATTTTATCACTTTAGTCCTTCTGGTATTCTGCATCCAATAACTGTTTTCTATGAACTAAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCCTGCACTCAAGGTTGGGATTACCCTATGATCGTCCCCTTCTTAGAATTTCTAATGCCTTGGATTTTTCGAAAGTGAAGAGCAATGGGATGATCTCTCTACAGAAAGGTTCAACTTTGCTCAGAGATGTACACTTTGGGATTCCAAGTAGTGGGGTTACGGGGGGAACTGTTTCCCTTGTTCAAGGTTCATATGAATACTTCCATTATCTTCATGAAGGTTATAATGATTCGGTAATTGCAATTCTTCTGCTAAGTTTTTTGGAATTTTTCGTCGCCCTTGCCATTGCAATCACTTCCGCCACTGCAACTACTATCGCCGCCACCATGGGTATTGTCATTGGAGTTTCAGTTCAAATTGACGACCACATGGTATTGATAGTCTCGGCCAGGCTATGCCATCAAAGCTGCCACCACACTCCCTCACGCGCCGTTCAAAGTTGTGCCTTTGTCCGTTTCATTGCCGCGTGTGGTGGCATGCCGCTACTCTTTGGCAGCGATCACCTACTTCGACATCATCTCTTCAATGTTGTTGCTTCTCAAAATATAGAGCAACAGTCGAAGTTCTTCATGGTATTGGCATTACACGGACTTGCTGATAAATATTTCCATGTTGAAGTTTCCCTGATGTACCCTATTTTACTTCTACTTGTTCCACCCTTTTGCCTAGGAAAAGGGCATAACAATTGTGACCTTTGTGGTAAACTAGGCCACAAGATTGACAGGTGTTATGCATTACATGGTCGTCCTCCTCGATCTATTGCTGTTGCTCAAACTGATCCTCCCTCACAATCATTTAATAATGTGGATCCTCCTCCATCTGGTATATCTTTTGTTGGTTTGACTCAATCTTCTTTTGTTAGTCCTTGGGTTCTCAACTCAGGAGCCACAAATCACATTACTGATTGGAGATCGAGGCAAGTGATTGGCATCAGATATGTCACCTTCAATAAGTTTCCTTTTTACTCTAAGGGTCCTTCTTCTGATGTATCTTTGTCTACTACGGTTAATATTACTATTGTCTATGATCCTCCTGTTGTGCCTAGTCCACCGTCAGATTCTCTCCTCACCACCTCTTCTGGTTTATATTTGAGGACATCGTTCCCAACAACCATCAAGTGGATGTTTTCTATAAAAGTTTGTCCTAATGGTACTATTGAGTGCTTCAAAGCTCAAGTTGTGGCCAAAGCCATGGCTGCTCTTCAACAATGGTCTTTGTATTATCTAGATGTCAAAATTGTTTTTCTCAATAGAGATTTGCAGGAAAAAATTTATATGGAGCAACCTCCCAGATTTGTTGCTCAGGGGAATCTTTTGTATTGTGACCACCATGGCATCTCTCGGATGAAGCAACTATTTTGCCTCAAATTTCAAACCAAAGATCTTGACAAACTCAAGTATTTCTTGGGTATTGAGGGATGGGGTTGTGCATACCGCTCTCTCCAGACTATTATTTCATGGTTCAGACTTCAAAACTACACGTCCATAGAAGTTCCTTCTCATAGGGAAATACAGCAGACACTTGTTGAGATTGGTGATAAAGACCCTTCTTTTATTGGATCAAGAGAATGGATAGGTGCAATTGAATTGAGCTTTGTTTTGGACAAACTTTTGGGTGTTACATGCAAAGTCATCAATGTTAGATCTGGATCTGAGCTGCCGGAAAAATGTCGAGAGCTGGCATTGCACTTTGAGAACCAAAATACACCAGTTATGATTGGGCTTTGCCATCATCAGTTGGCATTGACTGGAGCCTGCCTGTTCCTTGTAATTGTCAATGATATGGAGAATGGTGTTAATATGGTATGCATCATAGATCTGAATGGCCTTATTCCACCTGGAGGAATGGTTTCTATCAATAACCTGTCCAACCTTGTCCTTAAAGCTAAAATCTTGAAACTTGGAACGAATGAATGTGTCGAGTCTTCACCATCTTGCACAGCCAACACTGCCTCTGGTGTTGGAAACACATCCTTCTTAGTTAAAACTAAGAGATCGTTTATAGAGGACAAGCCAAATGAGCATTTCTTCCCATTTGCTACAAAGGATTGTGTTTCCAGTAAAGACAAGACTTCATGCAAATGGGACAAATGTGTGCTCCAATCTAGACCACGCAAATTGGGTAGTAACGGAGGCTTCATGAGACTGGAGCTTGAGCTTAATAACTGCGAGCTCAGTAGCTCAATAATATGCATGGAGGGGAAGAGAAAGAAGTCAGAGCGGATTGAACAGACTGGTGGTGGTGTACTAGCATATACACTCTTGGGAGTAGATTACAATGAAGCAAGTGGAGACTGTGCATTTTTAATACTTGATCCCCACTATACAGGTTCGGATGATCTAAAGAAAATAGTGAATGGGGGATGGTGTGGGTGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCACGATAAGTTCTATAATCTACTATTGCCCCAAAGACCCAACATGGTCTGA 3642 0.4349 MADDNHRGVRLLSRPKQLNTKGSDPGIHSWLVGSPFLPPLTVASFLRCIHSLPSSSSSPDFLKESEDLRTLLPKGFEIIGAVASGEDSDARAAVDAASSLRKLLYREGTDRPLIGAVCGSDSGDMRFFVSESGNTTSLEAVPSVIEERDSEKCLWENACLLRCELPIKLPLYYAPKNPTDVEKAYVQAVEALIAKLRDPQAVYMLETTNKTSLDIPLPVIIRGVQLDFYADLSKIKTLADDEDGSDASSLSCSYFSNRSKAGSPVFSAENADTIQVSVLFNSFGTSSASTVPVAEYLPVEDEARLLVVDIKLDVLCYSSRELPLKYAVSSLIIPGLVDQLNTVQKLMLPNLLAQLPQPKFYHFSPSGILHPITVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRISNALDFSKVKSNGMISLQKGSTLLRDVHFGIPSSGVTGGTVSLVQGSYEYFHYLHEGYNDSVIAILLLSFLEFFVALAIAITSATATTIAATMGIVIGVSVQIDDHMVLIVSARLCHQSCHHTPSRAVQSCAFVRFIAACGGMPLLFGSDHLLRHHLFNVVASQNIEQQSKFFMVLALHGLADKYFHVEVSLMYPILLLLVPPFCLGKGHNNCDLCGKLGHKIDRCYALHGRPPRSIAVAQTDPPSQSFNNVDPPPSGISFVGLTQSSFVSPWVLNSGATNHITDWRSRQVIGIRYVTFNKFPFYSKGPSSDVSLSTTVNITIVYDPPVVPSPPSDSLLTTSSGLYLRTSFPTTIKWMFSIKVCPNGTIECFKAQVVAKAMAALQQWSLYYLDVKIVFLNRDLQEKIYMEQPPRFVAQGNLLYCDHHGISRMKQLFCLKFQTKDLDKLKYFLGIEGWGCAYRSLQTIISWFRLQNYTSIEVPSHREIQQTLVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVINVRSGSELPEKCRELALHFENQNTPVMIGLCHHQLALTGACLFLVIVNDMENGVNMVCIIDLNGLIPPGGMVSINNLSNLVLKAKILKLGTNECVESSPSCTANTASGVGNTSFLVKTKRSFIEDKPNEHFFPFATKDCVSSKDKTSCKWDKCVLQSRPRKLGSNGGFMRLELELNNCELSSSIICMEGKRKKSERIEQTGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGSDDLKKIVNGGWCGWKKAVDNKGKNFFLHDKFYNLLLPQRPNMV 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00931 1213 PANTHER UFM1-SPECIFIC PROTEASE 2 72 470 - -
Vian4g00931 1213 Pfam Peptidase family C78 1139 1205 IPR012462 -
Vian4g00931 1213 Pfam Peptidase family C78 864 976 IPR012462 -
Vian4g00931 1213 Gene3D - 832 982 - -
Vian4g00931 1213 Gene3D - 1118 1213 - -
Vian4g00931 1213 ProSiteProfiles Rhodanese domain profile. 1175 1193 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00931 Vian-Chr4 13443746 13456644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00931 761 831 Receptor kinase-like Gene Family AT4G23160 34.343 4.72e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00931 K01376 - gmx:100819651 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00931 4 13443746 13456644 Vian4g00931 4 13443746 13456644 ECH