Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00926 ATGGCTGCCACTGGAGGTGATGAGGGTCACAACAACCCTGCTCTTGACCCGGATTTGGATATTCCGGATACTCCGGATCTCCAGTTCGCTGAGTTCGGATCGGGTTGTTTCTGGGGAGCGGAGTTGGCCTTTCAGCGAATTGTGGGAGTGGTAAAGACCGAGGTCGGATATACTCAGGGCCACACACCTGACCCAGATTACAAACTGGTTTGCACAGGAACCACTAACCACGTTGAAGTGGTTCGGGTTCAGTTCGACCCGAAGGTTTCCCCCTACACGGATCTGCTTGCTCTGTTTTGGTCTCGACATAACCCAACTTCCATCAACCGCCAGGGCAACGATGTGGGTGCACAGTATAGATCAGGAATATACTACTACGACGAACAACAGGCTCATTTAGCCCAGGAATCGAAAGAAGCAAAACAGTTGGAGTTGAAGGAGAAGATTGTGACAGAAATTATTCCAGCTAAGAGGTTTTACAAAGCAGAGGACTACCATCAGCAATATCTGGAGAAGGGTGGAGGAAAAGGTGAATGCAACAAACAGTCAGCAGAAAAAGGTTGCTCTGATCCCATCAGGTGCTATGGCTGA 591 0.4941 MAATGGDEGHNNPALDPDLDIPDTPDLQFAEFGSGCFWGAELAFQRIVGVVKTEVGYTQGHTPDPDYKLVCTGTTNHVEVVRVQFDPKVSPYTDLLALFWSRHNPTSINRQGNDVGAQYRSGIYYYDEQQAHLAQESKEAKQLELKEKIVTEIIPAKRFYKAEDYHQQYLEKGGGKGECNKQSAEKGCSDPIRCYG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00926 196 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g00926 196 FunFam Peptide methionine sulfoxide reductase 16 196 - -
Vian4g00926 196 MobiDBLite consensus disorder prediction 173 196 - -
Vian4g00926 196 Gene3D Peptide methionine sulphoxide reductase MsrA 18 196 IPR036509 GO:0008113
Vian4g00926 196 Coils Coil 126 146 - -
Vian4g00926 196 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 30 173 IPR002569 GO:0008113
Vian4g00926 196 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 11 195 - -
Vian4g00926 196 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Vian4g00926 196 Pfam Peptide methionine sulfoxide reductase 31 174 IPR002569 GO:0008113
Vian4g00926 196 SUPERFAMILY Peptide methionine sulfoxide reductase 24 175 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00926 Vian-Chr4 13305111 13305825 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00926 K07304 - gmx:100527085 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00926 4 13305111 13305825 Vian4g00926 4 13305111 13305825 ECH