Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00921 ATGAGTAGTCGCCAGCTAACAGCTACTCCAAAAATGTCCCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAGGTTCAGACCACACATGCCCCAGATGGCCGTGAAATTGATGTCAAACCTATTCTACAAATCGTCGACGAAATTCTCCTTCGGTTCATTGCTCGCACTGTTGAGGGTTATGAAGTGAAAAGAGACCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTATATCATAAACAAAATTTCGTGTGAGCTATCATGCAAGTGTTCGGGAGGTGGAGATGCGCATTCATCAACAATGGTGTTACTGGGTTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACATTAGCAGCCTTTGCTGTTATTTTTGGAGAGTTTTGGCTTGTCGCTCAGTTGAGTGCTGAAAATACTCTTGCCAAGTCTGTGGCCCTTCTTAAGCAACTGCCAGATATTGCTGAGAATTTCATGTCATTGAAACCCCATTTTGAAGCACTCATTAGGCTGGTGAAGGCTGCAATGGATGTAACCACCTGCATCGTTGAATTCAAGGAGCTTCCATCTGACTACATTTCAGAGGACACACCTCCCATGTCTGTTGCCAGTACTCACATTCCTATTGCTTCCTACTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCTCAAATTGCTAGTCTCATAGGCACAAGAAATGAGTCCATTTCATCAACCACTGAGGCATGGGAGTTATCTAGTCTTGCTCACAAAGTTACTAGTATTCATGAGCACCTCAAGAGCCAACTGGTTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCATTCCATAATCTGATACGTCTTTTCGAGACAGTCCATATAGACAACATGAAAATTGTCAGAGCACTGATATATGCAAAGGATGATATCCTTCCACTCTTGGATGGAACTACAAAATCAAGGGTTAGTCTGGAGGTACTAAGGAGGAAACATGTGTTGCTGCTCATATCAGACCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCACGAGCGAGGGGTGACACACACTATGAGATGGTTTGGATCCCAGTTGTGGACAAAGGGATCTGGAATGAGGTGAACAAACAGAAGTTTGAGTATTTGCAGTCATTGATGCCATGGTACAGTGTCTGTGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACAGCTATTCTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCAGTCCATATGATATGGATTTGGGGCAATTTGGCCTTCCCCTTCACTAGTGAGAAAGAAGAATCACTGTGGAAGCAAGAGATTTGGAGCCTTGAACTGCTTGTTGATGGCATTGATCCTACAGTTTTAGAATGGATGGCAGAAGGAAAACTGGTATGTCTGTATGGAGGTGAAGACCTGGAGTGGATTGAGAAATTCACAGCAACAGCATTGAGTGTGGCAAAGGCTGGGAAGTTCCAGCTGGAGATGGCATACGTGGGAAAGAGCAACGCGAAGGAGCGGATGCAGAAGATGATAAAAGCGTTCACTACGAGAAAGTTCAGTTACTTTTGGCCCAACGTGACCTCCATTTGGTTCTTCTGGACCCGTTTGGAGAGCATGCTGTACTCCAAGTTGCAGCACGAAAGGACGGTGGAAAACGACGAGATCATGAGCGAAGTGATGACTGTGCTGAGCTTCGACGGCAGTGATCGAGGGTGGGCGATTTTCTGCATGGGCGCCACTGATATGGCCAGAGCCAAAGGTGACAGTTTTTTGATTTGCTTGCAGGACTTCGAAAAGTGGGGGCCTAGAATCGAGGAAGATGGTGTGGTGAAAGCCATGAACGATTACCTCAACCAAAACAAACCCCCACATCACTGCAACCGTTTGATCCTTCCTGGGAGCACTGGTGGCATACCCCAGAAGGTTGTGTGCGCTGAATGTGGACGCCAAATGGAGAAATACTTCATGTATCGTTGCTGTGTTGAGTAA 2106 0.4554 MSSRQLTATPKMSQRKERRMFSTSDDSAMTKQVQTTHAPDGREIDVKPILQIVDEILLRFIARTVEGYEVKRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLGYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTTCIVEFKELPSDYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSTTEAWELSSLAHKVTSIHEHLKSQLVLCYQYIDDKRHIEAFHNLIRLFETVHIDNMKIVRALIYAKDDILPLLDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPVVDKGIWNEVNKQKFEYLQSLMPWYSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMAEGKLVCLYGGEDLEWIEKFTATALSVAKAGKFQLEMAYVGKSNAKERMQKMIKAFTTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHERTVENDEIMSEVMTVLSFDGSDRGWAIFCMGATDMARAKGDSFLICLQDFEKWGPRIEEDGVVKAMNDYLNQNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00921 701 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 6 700 IPR039299 GO:0010088
Vian4g00921 701 Pfam Sieve element occlusion C-terminus 470 699 IPR027944 -
Vian4g00921 701 Pfam Sieve element occlusion N-terminus 24 308 IPR027942 -
Vian4g00921 701 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00921 Vian-Chr4 13152194 13155968 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00921 - - gmx:100811452 1321.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00921 4 13152194 13155968 Vian4g00921 4 13152194 13155968 ECH