Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00886 ATGGACGCAGATTCTGAAAATCGTGAAAATAGTGATTCTACCTTTGTTTGGGATCAGAAATCACAGCTTTACTTCCACGCTAGTAGTGGATTTTACCATGACCCTAATGCCGGGTGGTATTATAGCAGCAGAGATGGTGCTTATTACAAATTTGAGGATGGGAATTATGTACTTTTAGATTCCAATAAGGACGACAATGCAGACACATATCTGTGCAAGGAAACTACCACAGAAAGTCCTCAACAAATCTGTGATGGGAACGACATCGAGGATTATTTTTCCTTTCTTGAAAATAGATCTGAAACAAACCTACAGACAAGAATCCTGGCTAATGAAGCACTTGATGATGGAAATTCTGTGAGTAGTCCAACTTGTGAAAAGCCACCTCCACCACCATCAGAATGGTTAGAGGACACACTTATTGATCTGTACTTGTCTGGCTACAAGAATATATCAGTAAGTGAAGCTGATTGCGTGACAGTGCCGCTGGAAACAGATGATGGATATAACACTTTAGCAGCTGATGCTTACAGCAAAACTTATGAAGTGGAAGGTGAGTGGAACCCAAAACAAGAAGGTGAAAATGGCTTAGCTGATAGTAAAAGTATTGTAGATGAAGGTATAGCTTACAACAACTCTTATGAACTGGAAGAGGGTGAGTGGATCCCGGACATGGAGGATGAATGTGACATAGCTGATAGAAGTACCATAGATGAAGGTATGTTATTGGATGAAGAGAAATGGCGAGCTCAATATGGTCAAGTTACTGAATCAGGGAAAGATTTGGTTTTAGAGGTTCCAATTGTGGACTTGTGGGATTGGGAAATGGTTACGAGATTCAGAAGAGATGAAAAAGATAAAGTTGCAAGGTTGGTTGGAAGATTGGTGAGACCATCTGCAAAACAACATCCATCTATCCCTTCTGGTGGAGGGAAATTAAGATCTGCTCCCATTTGTGAAGCACATCTTGATCTGGTACGAGTTAGAACAGGACAAGTGTACAGATTGCGAAATCCTAGTGCAAAATATATGGCTTCATTATCTACTTATGATTCCTCAAATCCAACAAAACATTGGGATTTTCCCCAGCTATCACCTAATAGAAAAATCACTCAGCTCTCCAAGTCCAGTGAAAGCTCTGCTTCAGTTTCAGATGATATCCCTGTAGAGAAGGATTTGTCTGCATTACCAAGTCAGCCCTCTGTATCTAAGCAAGTTAAACATCAATACAGAGATAGGGCTGCTGAAAGAAGAATATTGCATGGTGGCTTCGGCATGGGTCCAGGACAGAAGAATCTGCCAGATATTTATAATACGCCATCTTCACCTGATGGTTGTTCTCAAGAAGCTGCATCAGAGGCCTTGGAGATGTCATTTGGAGCAGGTAGTTATGCCAGAAAACTTCTGAAAAGCATGGGTTGGAAGGAGGGGGAGGGGCTTGGAAGCTCTACGAAGGGCTTGGTGGAACCTATTCAACCAGTTGGAAATGTTGGCACTGCAGGTTTGGGATGGTCTCGTTGA 1521 0.4188 MDADSENRENSDSTFVWDQKSQLYFHASSGFYHDPNAGWYYSSRDGAYYKFEDGNYVLLDSNKDDNADTYLCKETTTESPQQICDGNDIEDYFSFLENRSETNLQTRILANEALDDGNSVSSPTCEKPPPPPSEWLEDTLIDLYLSGYKNISVSEADCVTVPLETDDGYNTLAADAYSKTYEVEGEWNPKQEGENGLADSKSIVDEGIAYNNSYELEEGEWIPDMEDECDIADRSTIDEGMLLDEEKWRAQYGQVTESGKDLVLEVPIVDLWDWEMVTRFRRDEKDKVARLVGRLVRPSAKQHPSIPSGGGKLRSAPICEAHLDLVRVRTGQVYRLRNPSAKYMASLSTYDSSNPTKHWDFPQLSPNRKITQLSKSSESSASVSDDIPVEKDLSALPSQPSVSKQVKHQYRDRAAERRILHGGFGMGPGQKNLPDIYNTPSSPDGCSQEAASEALEMSFGAGSYARKLLKSMGWKEGEGLGSSTKGLVEPIQPVGNVGTAGLGWSR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00886 506 ProSiteProfiles G-patch domain profile. 461 506 IPR000467 GO:0003676
Vian4g00886 506 MobiDBLite consensus disorder prediction 421 447 - -
Vian4g00886 506 SMART G-patch_5 459 505 IPR000467 GO:0003676
Vian4g00886 506 CDD OCRE 13 54 - -
Vian4g00886 506 Pfam G-patch domain 463 503 IPR000467 GO:0003676
Vian4g00886 506 Pfam OCRE domain 12 53 IPR041591 -
Vian4g00886 506 PANTHER RNA-BINDING PROTEIN 9 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00886 Vian-Chr4 12346794 12351854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00886 - - gmx:100806477 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00886 4 12346794 12351854 Vian4g00886 4 12346794 12351854 ECH