Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00883 ATGGCGTCAATTTGCGACACCGATATCCCGCTTCAACTGAAGAACATCGACGCTTTCTTCGCTTCTTACAGAAACTCCCTTCAATCCATCACAGCCACCGCAATCAAAGCCGCGCGATCTCAATCTCAACTGACAGAGGTTAAAGCTAAACTGAGGGAGGCTGAGGATGAATTGGTAAAGGCGCTGGCAGTTAAGACTCGGAGAGAGGCGAAGAGAATGGCTCTAAAGGATTCTATTGCTTCTGTGAAGGAACGAGTTGAAGTTATGAAGACAAAGATTCAGAGGCAGAGAAGCAAGTGCGAAGAATGTGCTTCTGTTGTATCGCAACACCGGCTTGTTTTGGCGGCATCTGAACAGAAATCAAATGAAAGCAATGAACTTAAAGATGAAGCCCAGGAGGTCATATCTTGGTACAATAGGATCCTTGGTTTTCATGTTGAAGGAGGACATGGGGTTAAATTCACTTTCAAGAATATTGATGAAAACAACCCAAATGAAGAGTTCCGTTTTACCATTCGTCATGAAGATGACATGTATACATTGCTAAATTGTGAACCATCTCTCAAAGATATCGACAAGTTGATCCATGAATTAAACAAGACAAATGGGCTATTTAAATTTGTCAGAACAATGAGGAGAAAGTTTCAAGAAGCAGTGACACAAGGCAGTCTATCTATGACAACAAATGAACACCAAGAGTCCACCTTTATCTCTGCATCTGCTCCAGTTTTTTCAACATTAACCATTACAGAAGGATATGAACATCAAGGTGAACCCACCAAAGGTAATACACATCTCCAGAAACAAGTCAATCAAAGAATGGTAAAATCAGCAATTCTATCCCCTGGATCTGCATCATCTGTTTGTCAATCTCCTCGTTTGAAGGTTGCCTTTAAAGCCTCAAATCTTGCTTGTGCATGCTGGCTAAGAAAGGCATGGGTGTTGTTCCATAGCTTTTGTGCTTCCGACTCGTCATTTGCTAGGCTCGAGCATTTACTCTCGTTACAATCTGCAAAGTATTTTCCACTTATCCCTTCTGTTTTTGAGCTCAGAGCGACATAG 1062 0.4181 MASICDTDIPLQLKNIDAFFASYRNSLQSITATAIKAARSQSQLTEVKAKLREAEDELVKALAVKTRREAKRMALKDSIASVKERVEVMKTKIQRQRSKCEECASVVSQHRLVLAASEQKSNESNELKDEAQEVISWYNRILGFHVEGGHGVKFTFKNIDENNPNEEFRFTIRHEDDMYTLLNCEPSLKDIDKLIHELNKTNGLFKFVRTMRRKFQEAVTQGSLSMTTNEHQESTFISASAPVFSTLTITEGYEHQGEPTKGNTHLQKQVNQRMVKSAILSPGSASSVCQSPRLKVAFKASNLACACWLRKAWVLFHSFCASDSSFARLEHLLSLQSAKYFPLIPSVFELRAT 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00883 353 Coils Coil 79 99 - -
Vian4g00883 353 FunFam Probable kinetochore protein spc25 123 221 - -
Vian4g00883 353 Pfam Chromosome segregation protein Spc25 148 216 IPR013255 GO:0007059|GO:0031262
Vian4g00883 353 PANTHER KINETOCHORE PROTEIN SPC25-RELATED 5 263 IPR045143 GO:0007059|GO:0031262
Vian4g00883 353 Coils Coil 114 134 - -
Vian4g00883 353 Coils Coil 37 64 - -
Vian4g00883 353 Gene3D Chromosome segregation protein Spc25 121 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00883 Vian-Chr4 12289886 12297801 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00883 K11550 - gmx:100804876 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00883 4 12289886 12297801 Vian4g00883 4 12289886 12297801 ECH